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3VE2
Biol. Unit 3
Info
Asym.Unit (371 KB)
Biol.Unit 1 (718 KB)
Biol.Unit 2 (718 KB)
Biol.Unit 3 (361 KB)
Biol.Unit 4 (183 KB)
Biol.Unit 5 (183 KB)
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(1)
Title
:
THE 2.1 ANGSTROM CRYSTAL STRUCTURE OF TRANSFERRIN BINDING PROTEIN B (TBPB) FROM SEROGROUP B M982 NEISSERIA MENINGITIDIS
Authors
:
C. Calmettes, T. F. Moraes
Date
:
06 Jan 12 (Deposition) - 22 Feb 12 (Release) - 05 Sep 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.14
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (2x)
Biol. Unit 2: A,B (2x)
Biol. Unit 3: A,B (1x)
Biol. Unit 4: A (1x)
Biol. Unit 5: B (1x)
Keywords
:
Lipoprotein, Transferrin Receptor, Iron Acquisition, Vaccine Candidate, Host Pathogen Interaction, Beta Barrel, Receptor, Transferrin, Outermembrane, Transferrin-Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Calmettes, J. Alcantara, R. H. Yu, A. B. Schryvers, T. F. Moraes
The Structural Basis Of Transferrin Sequestration By Transferrin-Binding Protein B.
Nat. Struct. Mol. Biol. V. 19 358 2012
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Hetero Components
(2, 11)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
2h: GLYCEROL (GOLh)
2i: GLYCEROL (GOLi)
2j: GLYCEROL (GOLj)
2k: GLYCEROL (GOLk)
3a: SODIUM ION (NAa)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
4e: SULFATE ION (SO4e)
4f: SULFATE ION (SO4f)
4g: SULFATE ION (SO4g)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
-1
Ligand/Ion
ACETATE ION
2
GOL
5
Ligand/Ion
GLYCEROL
3
NA
-1
Ligand/Ion
SODIUM ION
4
SO4
6
Ligand/Ion
SULFATE ION
[
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Sites
(20, 20)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
THR A:93 , ASP A:94 , GLY A:95 , SER A:97 , PHE A:150 , SER A:151 , HOH A:801 , HOH A:929 , HOH A:1031 , HOH B:888
BINDING SITE FOR RESIDUE GOL A 701
02
AC2
SOFTWARE
LYS A:194 , ACT A:708 , HOH A:855 , HOH A:923 , PRO B:54
BINDING SITE FOR RESIDUE GOL A 702
03
AC3
SOFTWARE
ARG A:49 , GLU A:92 , ALA A:145 , SER A:146 , GLU A:147 , HOH A:840 , HOH A:943 , HOH A:1013
BINDING SITE FOR RESIDUE GOL A 703
04
AC4
SOFTWARE
ARG A:46 , VAL A:87 , HOH A:816 , HOH A:989
BINDING SITE FOR RESIDUE GOL A 704
05
AC5
SOFTWARE
ASN A:131 , GLN A:133 , LYS A:345 , LYS A:347 , ASP A:348 , LYS A:349 , HOH A:991 , HOH A:992
BINDING SITE FOR RESIDUE GOL A 705
06
AC6
SOFTWARE
HIS A:129 , LYS A:183 , HOH A:1050
BINDING SITE FOR RESIDUE GOL A 706
07
AC7
SOFTWARE
GLU A:69 , ALA A:70 , HOH A:886 , HOH A:997
BINDING SITE FOR RESIDUE SO4 A 707
08
AC8
SOFTWARE
ARG A:50 , TRP A:52 , GLU A:57 , LYS A:207 , ARG A:211 , GOL A:702 , HOH A:820 , HOH A:855 , PRO B:54
BINDING SITE FOR RESIDUE ACT A 708
09
AC9
SOFTWARE
LYS A:207 , ARG A:211 , HOH A:980 , HOH A:981 , HOH A:1022 , TYR B:53 , LYS B:153 , HOH B:873
BINDING SITE FOR RESIDUE GOL B 701
10
BC1
SOFTWARE
ARG B:46 , HOH B:847 , HOH B:1024 , HOH B:1109
BINDING SITE FOR RESIDUE GOL B 702
11
BC2
SOFTWARE
LYS B:193 , LYS B:337 , HOH B:1078
BINDING SITE FOR RESIDUE GOL B 703
12
BC3
SOFTWARE
ASN B:131 , GLN B:133 , LYS B:345 , ASP B:348 , LYS B:349 , HOH B:1076
BINDING SITE FOR RESIDUE GOL B 704
13
BC4
SOFTWARE
HIS B:129 , LYS B:183 , LYS B:347 , HOH B:883
BINDING SITE FOR RESIDUE GOL B 705
14
BC5
SOFTWARE
HOH A:970 , ARG B:50 , TRP B:52 , GLU B:57 , LYS B:194 , ARG B:211 , HOH B:831 , HOH B:875
BINDING SITE FOR RESIDUE SO4 B 706
15
BC6
SOFTWARE
GLY B:178 , LYS B:179 , LYS B:232 , HIS B:273 , HOH B:834 , HOH B:1031 , HOH B:1032 , HOH B:1045 , HOH B:1046 , HOH B:1047 , HOH B:1068
BINDING SITE FOR RESIDUE SO4 B 707
16
BC7
SOFTWARE
TRP B:68 , GLU B:69 , ALA B:70 , HOH B:887
BINDING SITE FOR RESIDUE SO4 B 708
17
BC8
SOFTWARE
GLU B:58 , SER B:59 , GLU B:60
BINDING SITE FOR RESIDUE SO4 B 709
18
BC9
SOFTWARE
TYR A:53 , THR A:303 , ARG B:211 , HOH B:1075
BINDING SITE FOR RESIDUE SO4 B 710
19
CC1
SOFTWARE
THR B:75 , LYS B:82 , HOH B:856 , HOH B:1002
BINDING SITE FOR RESIDUE SO4 B 711
20
CC2
SOFTWARE
TYR B:41 , GLY B:72 , HOH B:941
BINDING SITE FOR RESIDUE NA B 712
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Show PDB file:
Asym.Unit (371 KB)
Header - Asym.Unit
Biol.Unit 1 (718 KB)
Header - Biol.Unit 1
Biol.Unit 2 (718 KB)
Header - Biol.Unit 2
Biol.Unit 3 (361 KB)
Header - Biol.Unit 3
Biol.Unit 4 (183 KB)
Header - Biol.Unit 4
Biol.Unit 5 (183 KB)
Header - Biol.Unit 5
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