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3V9M
Asym. Unit
Info
Asym.Unit (88 KB)
Biol.Unit 1 (82 KB)
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(1)
Title
:
PHOSPHOLIPASE ACII4 FROM AUSTRALIAN KING BROWN SNAKE
Authors
:
L. W. Guddat, E. K. Millers
Date
:
27 Dec 11 (Deposition) - 13 Feb 13 (Release) - 13 Feb 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.56
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Wing Motif, Phospholipase, Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Trabi, E. -K. Millers, R. Richards, H. Snelling, R. Keegan, M. F. Lavin, J. De Jersey, L. W. Guddat, P. Masci
Mechanistic Studies On The Anticoagulant Activity Of A Phospholipase A2 From The Venom Of The Australian King Brow Snake (Pseudechis Australis)
To Be Published
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Hetero Components
(4, 10)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
2a: 1,2-ETHANEDIOL (EDOa)
3a: DI(HYDROXYETHYL)ETHER (PEGa)
3b: DI(HYDROXYETHYL)ETHER (PEGb)
3c: DI(HYDROXYETHYL)ETHER (PEGc)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
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No.
Name
Count
Type
Full Name
1
CA
2
Ligand/Ion
CALCIUM ION
2
EDO
1
Ligand/Ion
1,2-ETHANEDIOL
3
PEG
3
Ligand/Ion
DI(HYDROXYETHYL)ETHER
4
SO4
4
Ligand/Ion
SULFATE ION
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PHE A:5 , HOH A:403 , HOH A:433 , HOH A:440
BINDING SITE FOR RESIDUE EDO A 201
02
AC2
SOFTWARE
PRO A:82 , CYS A:84 , LYS A:85 , HOH A:408 , HOH A:417 , HOH A:430
BINDING SITE FOR RESIDUE SO4 A 202
03
AC3
SOFTWARE
GLN A:4 , ASN A:7 , TRP A:69 , HOH A:400 , HOH A:401 , HOH A:402 , GLN B:4 , ASN B:7 , TRP B:69
BINDING SITE FOR RESIDUE SO4 A 203
04
AC4
SOFTWARE
SER A:16 , ARG A:17 , TYR A:104 , LYS A:115
BINDING SITE FOR RESIDUE SO4 A 204
05
AC5
SOFTWARE
TYR A:28 , GLY A:30 , GLY A:32 , ASP A:49 , HOH A:440 , HOH A:468
BINDING SITE FOR RESIDUE CA A 205
06
AC6
SOFTWARE
TRP A:31 , LYS A:63 , HOH A:403 , CYS B:60
BINDING SITE FOR RESIDUE PEG A 206
07
AC7
SOFTWARE
PRO B:82 , GLY B:83 , CYS B:84 , LYS B:85 , HOH B:356 , HOH B:458
BINDING SITE FOR RESIDUE SO4 B 201
08
AC8
SOFTWARE
TYR B:28 , GLY B:30 , GLY B:32 , ASP B:49 , HOH B:459 , HOH B:460
BINDING SITE FOR RESIDUE CA B 202
09
AC9
SOFTWARE
TYR B:22 , HOH B:371 , HOH B:460
BINDING SITE FOR RESIDUE PEG B 203
10
BC1
SOFTWARE
GLY A:56 , CYS A:60 , TRP B:31 , LYS B:63 , HOH B:402
BINDING SITE FOR RESIDUE PEG B 204
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: PA2_HIS (A:44-51,B:44-51)
2: PA2_ASP (A:88-98,B:88-98)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PA2_HIS
PS00118
Phospholipase A2 histidine active site.
PA2BB_PSEAU
44-51
2
A:44-51
B:44-51
2
PA2_ASP
PS00119
Phospholipase A2 aspartic acid active site.
PA2BB_PSEAU
88-98
2
A:88-98
B:88-98
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3v9ma_ (A:)
1b: SCOP_d3v9mb_ (B:)
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Protein Domains
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Organisms
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(
)
Class
:
All alpha proteins
(14657)
Fold
:
Phospholipase A2, PLA2
(282)
Superfamily
:
Phospholipase A2, PLA2
(282)
Family
:
Vertebrate phospholipase A2
(271)
Protein domain
:
automated matches
(75)
Pseudechis australis [TaxId: 8670]
(1)
1a
d3v9ma_
A:
1b
d3v9mb_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Sorry, no Info available
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (88 KB)
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