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3V7D
Asym. Unit
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Asym.Unit (417 KB)
Biol.Unit 1 (208 KB)
Biol.Unit 2 (203 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF SCSKP1-SCCDC4-PSIC1 PEPTIDE COMPLEX
Authors
:
X. Tang, S. Orlicky, T. Mittag, V. Csizmok, T. Pawson, J. Forman-Kay, F. M. Tyers
Date
:
20 Dec 11 (Deposition) - 02 May 12 (Release) - 02 May 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.31
Chains
:
Asym. Unit : A,B,C,D,E
Biol. Unit 1: A,B,E (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Wd 40 Domain, Phospho-Peptide Complex, E3 Ubiquitin Ligase, Ligase, Cell Cycle, Phospho Binding Protein, Sic1, Phosphorylation
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Gene Ontology, PubMed, Web (Google)
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Reference
:
X. Tang, S. Orlicky, T. Mittag, V. Csizmok, T. Pawson, J. D. Forman-Kay F. Sicheri, M. Tyers
Composite Low Affinity Interactions Dictate Recognition Of The Cyclin-Dependent Kinase Inhibitor Sic1 By The Scfcdc4 Ubiquitin Ligase.
Proc. Natl. Acad. Sci. Usa V. 109 3287 2012
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Hetero Components
(1, 2)
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1a: PHOSPHOSERINE (SEPa)
1b: PHOSPHOSERINE (SEPb)
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No.
Name
Count
Type
Full Name
1
SEP
2
Mod. Amino Acid
PHOSPHOSERINE
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Sites
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PROSITE Patterns/Profiles
(2, 10)
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1: FBOX (B:272-319,D:272-319)
2: WD_REPEATS_1 (B:436-450,D:436-450|B:543-557,D:54...)
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FBOX
PS50181
F-box domain profile.
CDC4_YEAST
272-319
2
B:272-319
D:272-319
2
WD_REPEATS_1
PS00678
Trp-Asp (WD) repeats signature.
CDC4_YEAST
436-450
543-557
585-599
645-659
8
B:436-450
D:436-450
B:543-557
D:543-557
B:585-599
D:585-599
B:645-659
D:645-659
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Exons
(2, 4)
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All Exons
Exon 1.1 (A:3-188 (gaps) | C:4-188 (gaps))
Exon 2.1 (B:269-744 (gaps) | D:270-744 (gaps...)
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1: Boundary -/1.1
2: Boundary 1.1/-
3: Boundary -/2.1
4: Boundary 2.1/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
YDR328C
1
YDR328C.1
IV:1126014-1125430
585
SKP1_YEAST
1-194
194
2
A:3-188 (gaps)
C:4-188 (gaps)
186
185
2.1
YFL009W
1
YFL009W.1
VI:116139-118478
2340
CDC4_YEAST
1-779
779
2
B:269-744 (gaps)
D:270-744 (gaps)
476
475
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Asym.Unit (417 KB)
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