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3UWD
Asym. Unit
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Asym.Unit (142 KB)
Biol.Unit 1 (135 KB)
Biol.Unit 2 (267 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PHOSPHOGLYCERATE KINASE FROM BACILLUS ANTHRACIS
Authors
:
H. Zheng, M. Chruszcz, P. Porebski, M. Kudritska, S. Grimshaw, A. Savch W. F. Anderson, W. Minor, Center For Structural Genomics Of Infe Diseases (Csgid)
Date
:
01 Dec 11 (Deposition) - 11 Jan 12 (Release) - 23 May 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.68
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Biol. Unit 2: A (2x)
Keywords
:
Anthrax, Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Rossmann Fold, Phosphoglycerate Kinase, Phosphoglycerate, Phosphorylation, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Zheng, E. V. Filippova, K. L. Tkaczuk, P. Dworzynski, M. Chruszcz, P. J. Porebski, Z. Wawrzak, O. Onopriyenko, M. Kudritska, S. Grimshaw A. Savchenko, W. F. Anderson, W. Minor
Crystal Structures Of Putative Phosphoglycerate Kinases Fro B. Anthracis And C. Jejuni.
J. Struct. Funct. Genom. V. 13 15 2012
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Hetero Components
(5, 20)
Info
All Hetero Components
1a: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-... (BTBa)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
2d: CHLORIDE ION (CLd)
2e: CHLORIDE ION (CLe)
3a: MAGNESIUM ION (MGa)
4a: SELENOMETHIONINE (MSEa)
4b: SELENOMETHIONINE (MSEb)
4c: SELENOMETHIONINE (MSEc)
4d: SELENOMETHIONINE (MSEd)
4e: SELENOMETHIONINE (MSEe)
4f: SELENOMETHIONINE (MSEf)
4g: SELENOMETHIONINE (MSEg)
4h: SELENOMETHIONINE (MSEh)
4i: SELENOMETHIONINE (MSEi)
4j: SELENOMETHIONINE (MSEj)
4k: SELENOMETHIONINE (MSEk)
4l: SELENOMETHIONINE (MSEl)
5a: UNKNOWN LIGAND (UNLa)
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No.
Name
Count
Type
Full Name
1
BTB
1
Ligand/Ion
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
2
CL
5
Ligand/Ion
CHLORIDE ION
3
MG
1
Ligand/Ion
MAGNESIUM ION
4
MSE
12
Mod. Amino Acid
SELENOMETHIONINE
5
UNL
1
Ligand/Ion
UNKNOWN LIGAND
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:206 , PHE A:249
BINDING SITE FOR RESIDUE CL A 395
2
AC2
SOFTWARE
GLY A:195 , ALA A:196 , GLY A:220 , HOH A:512
BINDING SITE FOR RESIDUE CL A 396
3
AC3
SOFTWARE
LYS A:256 , LYS A:383 , GLU A:384
BINDING SITE FOR RESIDUE CL A 397
4
AC4
SOFTWARE
GLY A:317 , GLY A:350 , ASP A:352 , SER A:353 , HOH A:678
BINDING SITE FOR RESIDUE CL A 398
5
AC5
SOFTWARE
LYS A:180 , GLU A:186 , LEU A:312 , HOH A:446 , HOH A:449
BINDING SITE FOR RESIDUE CL A 399
6
AC6
SOFTWARE
HOH A:403 , HOH A:404 , HOH A:405 , HOH A:406 , HOH A:407 , HOH A:408
BINDING SITE FOR RESIDUE MG A 400
7
AC7
SOFTWARE
ARG A:187 , ASP A:210 , LYS A:211 , VAL A:212 , ASP A:213 , LYS A:256 , GLU A:384 , HOH A:523 , HOH A:562 , HOH A:567 , HOH A:712
BINDING SITE FOR RESIDUE BTB A 401
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PGLYCERATE_KINASE (A:15-25)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PGLYCERATE_KINASE
PS00111
Phosphoglycerate kinase signature.
PGK_BACAN
15-25
1
A:15-25
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3uwda_ (A:)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Phosphoglycerate kinase
(42)
Superfamily
:
Phosphoglycerate kinase
(42)
Family
:
Phosphoglycerate kinase
(39)
Protein domain
:
automated matches
(23)
Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
(1)
1a
d3uwda_
A:
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (142 KB)
Header - Asym.Unit
Biol.Unit 1 (135 KB)
Header - Biol.Unit 1
Biol.Unit 2 (267 KB)
Header - Biol.Unit 2
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