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3UVI
Asym. Unit
Info
Asym.Unit (79 KB)
Biol.Unit 1 (73 KB)
Biol.Unit 2 (144 KB)
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(1)
Title
:
TRNA-GUANINE TRANSGLYCOSYLASE C158S C281S W326E E339Q MUTANT
Authors
:
S. Jakobi, A. Heine, G. Klebe
Date
:
30 Nov 11 (Deposition) - 14 Nov 12 (Release) - 15 Oct 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.55
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Biol. Unit 2: A (2x)
Keywords
:
Tgt, Dimer Interface, Glycosyltransferase, Metal-Binding, Queuosine Biosynthesis, Transferase, Trna Processing, Zinc Binding, Guanine Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Jakobi, T. X. Nguyen, F. Debaene, A. Metz, S. Sanglier-Cianferani, K. Reuter, G. Klebe
Hot-Spot Analysis To Dissect The Functional Protein-Protein Interface Of A Trna-Modifying Enzyme.
Proteins V. 82 2713 2014
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Hetero Components
(5, 16)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
2a: DIMETHYL SULFOXIDE (DMSa)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
3c: GLYCEROL (GOLc)
3d: GLYCEROL (GOLd)
4a: IODIDE ION (IODa)
4b: IODIDE ION (IODb)
4c: IODIDE ION (IODc)
4d: IODIDE ION (IODd)
4e: IODIDE ION (IODe)
4f: IODIDE ION (IODf)
4g: IODIDE ION (IODg)
4h: IODIDE ION (IODh)
5a: ZINC ION (ZNa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
2
Ligand/Ion
CHLORIDE ION
2
DMS
1
Ligand/Ion
DIMETHYL SULFOXIDE
3
GOL
4
Ligand/Ion
GLYCEROL
4
IOD
8
Ligand/Ion
IODIDE ION
5
ZN
1
Ligand/Ion
ZINC ION
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
CYS A:318 , CYS A:320 , CYS A:323 , HIS A:349
BINDING SITE FOR RESIDUE ZN A 387
02
AC2
SOFTWARE
LYS A:264 , TYR A:381
BINDING SITE FOR RESIDUE IOD A 388
03
AC3
SOFTWARE
ALA A:53
BINDING SITE FOR RESIDUE IOD A 389
04
AC4
SOFTWARE
ASN A:301
BINDING SITE FOR RESIDUE IOD A 392
05
AC5
SOFTWARE
MET A:93 , HIS A:333 , GLN A:339
BINDING SITE FOR RESIDUE IOD A 393
06
AC6
SOFTWARE
VAL A:45 , SER A:281 , PRO A:284 , THR A:285
BINDING SITE FOR RESIDUE IOD A 394
07
AC7
SOFTWARE
HIS A:333
BINDING SITE FOR RESIDUE CL A 396
08
AC8
SOFTWARE
ALA A:163 , THR A:164 , ARG A:167 , HOH A:618 , HOH A:657
BINDING SITE FOR RESIDUE CL A 397
09
AC9
SOFTWARE
PRO A:56 , GLY A:94 , TRP A:95 , ASP A:96 , ARG A:97 , HOH A:664 , HOH A:712
BINDING SITE FOR RESIDUE GOL A 398
10
BC1
SOFTWARE
ALA A:61 , CYS A:320 , ALA A:321 , GLU A:348 , HOH A:676 , HOH A:739
BINDING SITE FOR RESIDUE GOL A 399
11
BC2
SOFTWARE
PHE A:14 , SER A:15 , PHE A:16 , GLU A:119 , ARG A:174 , ARG A:177 , LYS A:255 , HOH A:459 , HOH A:524 , HOH A:558 , HOH A:746
BINDING SITE FOR RESIDUE GOL A 400
12
BC3
SOFTWARE
GLU A:273 , ARG A:274 , HOH A:530 , HOH A:559
BINDING SITE FOR RESIDUE GOL A 401
13
BC4
SOFTWARE
MET A:172 , MET A:176 , GLN A:213 , ALA A:217 , HOH A:637 , HOH A:709 , HOH A:801
BINDING SITE FOR RESIDUE DMS A 402
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3uvia_ (A:)
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)
Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
tRNA-guanine transglycosylase
(91)
Family
:
tRNA-guanine transglycosylase
(91)
Protein domain
:
Queosine tRNA-guanine transglycosylase
(87)
Zymomonas mobilis [TaxId: 542]
(67)
1a
d3uvia_
A:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(0, 0)
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Sorry, no Info available
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Chain A
Asymmetric Unit 1
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Asym.Unit (79 KB)
Header - Asym.Unit
Biol.Unit 1 (73 KB)
Header - Biol.Unit 1
Biol.Unit 2 (144 KB)
Header - Biol.Unit 2
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