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3UUS
Asym. Unit
Info
Asym.Unit (641 KB)
Biol.Unit 1 (634 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE DATP INHIBITED E. COLI CLASS IA RIBONUCLEOTIDE REDUCTASE COMPLEX
Authors
:
C. M. Zimanyi, C. L. Drennan
Date
:
28 Nov 11 (Deposition) - 21 Dec 11 (Release) - 11 Jan 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
5.65
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D,E,F,G,H (1x)
Keywords
:
10 Stranded Alpha/Beta Barrel, Datp Bound, Di-Iron, Oxidoreductase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. Ando, E. J. Brignole, C. M. Zimanyi, M. A. Funk, K. Yokoyama, F. J. Asturias, J. Stubbe, C. L. Drennan
Structural Interconversions Modulate Activity Of Escherichi Coli Ribonucleotide Reductase.
Proc. Natl. Acad. Sci. Usa V. 108 21046 2011
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Hetero Components
(2, 16)
Info
All Hetero Components
1a: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE (DTPa)
1b: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE (DTPb)
1c: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE (DTPc)
1d: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE (DTPd)
1e: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE (DTPe)
1f: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE (DTPf)
1g: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE (DTPg)
1h: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE (DTPh)
2a: FE (III) ION (FEa)
2b: FE (III) ION (FEb)
2c: FE (III) ION (FEc)
2d: FE (III) ION (FEd)
2e: FE (III) ION (FEe)
2f: FE (III) ION (FEf)
2g: FE (III) ION (FEg)
2h: FE (III) ION (FEh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
DTP
8
Ligand/Ion
2'-DEOXYADENOSINE 5'-TRIPHOSPHATE
2
FE
8
Ligand/Ion
FE (III) ION
[
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
VAL A:7 , LYS A:9 , GLU A:15 , ARG A:16 , ILE A:17 , ASN A:18 , ILE A:22 , THR A:55 , ILE A:58 , HIS A:59 , PHE A:87 , LYS A:91
BINDING SITE FOR RESIDUE DTP A 800
02
AC2
SOFTWARE
ASP A:232 , SER A:233 , LEU A:234 , ILE A:237 , ARG A:262 , ILE A:268 , HIS A:275 , THR A:276 , PHE A:281 , SER B:249 , CYS B:292
BINDING SITE FOR RESIDUE DTP A 900
03
AC3
SOFTWARE
VAL B:7 , LYS B:9 , ARG B:10 , ARG B:16 , ASN B:18 , LYS B:21 , ILE B:22 , VAL B:25 , THR B:55 , ILE B:58 , HIS B:59 , PHE B:87 , LYS B:91
BINDING SITE FOR RESIDUE DTP B 800
04
AC4
SOFTWARE
SER A:249 , CYS A:292 , ASP B:232 , SER B:233 , LEU B:234 , ILE B:237 , ARG B:262 , ILE B:268 , HIS B:275 , THR B:276 , PHE B:281
BINDING SITE FOR RESIDUE DTP B 900
05
AC5
SOFTWARE
GLU C:15 , ARG C:16 , ASN C:18 , LYS C:21 , ILE C:22 , THR C:55 , ILE C:58 , HIS C:59 , PHE C:87 , LYS C:91
BINDING SITE FOR RESIDUE DTP C 800
06
AC6
SOFTWARE
ASP C:232 , SER C:233 , LEU C:234 , ILE C:237 , ARG C:262 , ILE C:268 , ARG C:269 , HIS C:275 , THR C:276 , PHE C:281 , SER D:249 , CYS D:292
BINDING SITE FOR RESIDUE DTP C 900
07
AC7
SOFTWARE
VAL D:7 , LYS D:9 , GLU D:15 , ARG D:16 , ILE D:17 , ASN D:18 , LYS D:21 , ILE D:22 , VAL D:25 , THR D:55 , HIS D:59 , LYS D:91
BINDING SITE FOR RESIDUE DTP D 800
08
AC8
SOFTWARE
SER C:249 , CYS C:292 , ASP D:232 , SER D:233 , LEU D:234 , ILE D:261 , ARG D:262 , ILE D:268 , ARG D:269 , HIS D:275 , THR D:276 , PHE D:281
BINDING SITE FOR RESIDUE DTP D 900
09
AC9
SOFTWARE
ASP E:84 , GLU E:115 , HIS E:118 , GLU E:238 , FE E:1004
BINDING SITE FOR RESIDUE FE E 1003
10
BC1
SOFTWARE
GLU E:115 , GLU E:204 , GLU E:238 , HIS E:241 , FE E:1003
BINDING SITE FOR RESIDUE FE E 1004
11
BC2
SOFTWARE
ASP F:84 , GLU F:115 , HIS F:118 , GLU F:238 , FE F:1002
BINDING SITE FOR RESIDUE FE F 1001
12
BC3
SOFTWARE
GLU F:115 , GLU F:204 , GLU F:238 , HIS F:241 , FE F:1001
BINDING SITE FOR RESIDUE FE F 1002
13
BC4
SOFTWARE
ASP G:84 , GLU G:115 , HIS G:118 , GLU G:238 , FE G:1004
BINDING SITE FOR RESIDUE FE G 1003
14
BC5
SOFTWARE
GLU G:115 , GLU G:204 , GLU G:238 , HIS G:241 , FE G:1003
BINDING SITE FOR RESIDUE FE G 1004
15
BC6
SOFTWARE
ASP H:84 , GLU H:115 , HIS H:118 , GLU H:238 , FE H:1002
BINDING SITE FOR RESIDUE FE H 1001
16
BC7
SOFTWARE
GLU H:115 , GLU H:204 , GLU H:238 , HIS H:241 , FE H:1001
BINDING SITE FOR RESIDUE FE H 1002
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 8)
Info
All PROSITE Patterns/Profiles
1: RIBORED_SMALL (E:114-130,F:114-130,G:114-130,H:11...)
2: RIBORED_LARGE (A:599-621,B:599-621,C:599-621,D:59...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RIBORED_SMALL
PS00368
Ribonucleotide reductase small subunit signature.
RIR2_ECOLI
115-131
4
E:114-130
F:114-130
G:114-130
H:114-130
2
RIBORED_LARGE
PS00089
Ribonucleotide reductase large subunit signature.
RIR1_ECOLI
599-621
4
A:599-621
B:599-621
C:599-621
D:599-621
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (641 KB)
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