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3USU
Biol. Unit 1
Info
Asym.Unit (642 KB)
Biol.Unit 1 (321 KB)
Biol.Unit 2 (317 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF BUTEA MONOSPERMA SEED LECTIN
Authors
:
J. Abhilash, K. Geethanandan, S. R. Bharath, C. Sadasivan, M. Haridas
Date
:
24 Nov 11 (Deposition) - 04 Jan 12 (Release) - 04 Jan 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.46
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F,G,H (1x)
Keywords
:
N-Linked Glycosylation, Sugar Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Abhilash, K. Geethanandan, S. R. Bharath, C. Sadasivan, M. Haridas
Crystal Structure Of Butea Monosperma Seed Lectin
To Be Published
[
close entry info
]
Hetero Components
(7, 23)
Info
All Hetero Components
1a: GAMMA-AMINO-BUTANOIC ACID (ABUa)
1b: GAMMA-AMINO-BUTANOIC ACID (ABUb)
1c: GAMMA-AMINO-BUTANOIC ACID (ABUc)
1d: GAMMA-AMINO-BUTANOIC ACID (ABUd)
1e: GAMMA-AMINO-BUTANOIC ACID (ABUe)
1f: GAMMA-AMINO-BUTANOIC ACID (ABUf)
1g: GAMMA-AMINO-BUTANOIC ACID (ABUg)
1h: GAMMA-AMINO-BUTANOIC ACID (ABUh)
2a: BETA-D-MANNOSE (BMAa)
2b: BETA-D-MANNOSE (BMAb)
2c: BETA-D-MANNOSE (BMAc)
2d: BETA-D-MANNOSE (BMAd)
3a: CALCIUM ION (CAa)
3b: CALCIUM ION (CAb)
3c: CALCIUM ION (CAc)
3d: CALCIUM ION (CAd)
3e: CALCIUM ION (CAe)
3f: CALCIUM ION (CAf)
3g: CALCIUM ION (CAg)
3h: CALCIUM ION (CAh)
4a: ALPHA-L-FUCOSE (FUCa)
4b: ALPHA-L-FUCOSE (FUCb)
4c: ALPHA-L-FUCOSE (FUCc)
4d: ALPHA-L-FUCOSE (FUCd)
4e: ALPHA-L-FUCOSE (FUCe)
5a: GLYCEROL (GOLa)
5b: GLYCEROL (GOLb)
5c: GLYCEROL (GOLc)
5d: GLYCEROL (GOLd)
5e: GLYCEROL (GOLe)
5f: GLYCEROL (GOLf)
5g: GLYCEROL (GOLg)
5h: GLYCEROL (GOLh)
6a: ALPHA-D-MANNOSE (MANa)
7a: MANGANESE (II) ION (MNa)
7b: MANGANESE (II) ION (MNb)
7c: MANGANESE (II) ION (MNc)
7d: MANGANESE (II) ION (MNd)
7e: MANGANESE (II) ION (MNe)
7f: MANGANESE (II) ION (MNf)
7g: MANGANESE (II) ION (MNg)
7h: MANGANESE (II) ION (MNh)
8a: N-ACETYL-D-GLUCOSAMINE (NAGa)
8b: N-ACETYL-D-GLUCOSAMINE (NAGb)
8c: N-ACETYL-D-GLUCOSAMINE (NAGc)
8d: N-ACETYL-D-GLUCOSAMINE (NAGd)
8e: N-ACETYL-D-GLUCOSAMINE (NAGe)
8f: N-ACETYL-D-GLUCOSAMINE (NAGf)
8g: N-ACETYL-D-GLUCOSAMINE (NAGg)
8h: N-ACETYL-D-GLUCOSAMINE (NAGh)
8i: N-ACETYL-D-GLUCOSAMINE (NAGi)
8j: N-ACETYL-D-GLUCOSAMINE (NAGj)
8k: N-ACETYL-D-GLUCOSAMINE (NAGk)
8l: N-ACETYL-D-GLUCOSAMINE (NAGl)
9a: BETA-D-XYLOPYRANOSE (XYPa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ABU
4
Ligand/Ion
GAMMA-AMINO-BUTANOIC ACID
2
BMA
3
Ligand/Ion
BETA-D-MANNOSE
3
CA
-1
Ligand/Ion
CALCIUM ION
4
FUC
3
Ligand/Ion
ALPHA-L-FUCOSE
5
GOL
4
Ligand/Ion
GLYCEROL
6
MAN
1
Ligand/Ion
ALPHA-D-MANNOSE
7
MN
-1
Ligand/Ion
MANGANESE (II) ION
8
NAG
7
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
9
XYP
1
Ligand/Ion
BETA-D-XYLOPYRANOSE
[
close Hetero Component info
]
Sites
(34, 34)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC9 (SOFTWARE)
33: EC1 (SOFTWARE)
34: EC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:129 , TYR A:131 , ASN A:133 , ASP A:138 , HOH A:306 , HOH A:387
BINDING SITE FOR RESIDUE CA A 264
02
AC2
SOFTWARE
GLU A:127 , ASP A:129 , ASP A:138 , HIS A:143 , HOH A:257 , HOH A:284
BINDING SITE FOR RESIDUE MN A 265
03
AC3
SOFTWARE
THR A:172 , LYS B:168 , VAL B:169 , LEU B:170
BINDING SITE FOR RESIDUE GOL B 281
04
AC4
SOFTWARE
ASN A:3 , ASP A:5 , PRO A:57 , ILE A:58 , ASN A:59 , TRP A:208 , SER A:236 , LEU A:238 , HOH A:588 , ASN D:18
BINDING SITE FOR RESIDUE ABU A 280
05
AC5
SOFTWARE
PHE A:117 , ASN A:118 , FUC A:302 , NAG A:303 , SER F:220 , LEU H:137
BINDING SITE FOR RESIDUE NAG A 301
06
AC6
SOFTWARE
NAG A:301 , NAG A:303 , ALA H:115 , THR H:134 , VAL H:135 , LEU H:137
BINDING SITE FOR RESIDUE FUC A 302
07
AC7
SOFTWARE
NAG A:301 , FUC A:302 , BMA A:304 , SER F:220 , HOH F:398
BINDING SITE FOR RESIDUE NAG A 303
08
AC8
SOFTWARE
NAG A:303 , TYR F:131
BINDING SITE FOR RESIDUE BMA A 304
09
AC9
SOFTWARE
ASP B:129 , TYR B:131 , ASN B:133 , ASP B:138 , HOH B:353 , HOH B:360
BINDING SITE FOR RESIDUE CA B 260
10
BC1
SOFTWARE
GLU B:127 , ASP B:129 , ASP B:138 , HIS B:143 , HOH B:254 , HOH B:363
BINDING SITE FOR RESIDUE MN B 261
11
BC2
SOFTWARE
LYS A:168 , THR B:172 , VAL B:181
BINDING SITE FOR RESIDUE GOL A 277
12
BC3
SOFTWARE
ASN B:3 , THR B:4 , ASP B:5 , PRO B:57 , ILE B:58 , ASN B:59 , TRP B:208 , SER B:236 , LYS B:237 , LEU B:238 , HOH B:589 , ASN C:18
BINDING SITE FOR RESIDUE ABU B 276
13
BC4
SOFTWARE
VAL B:116 , ASN B:118 , SER B:120 , HOH B:268 , FUC B:302 , NAG B:303 , ASN F:41 , VAL F:43
BINDING SITE FOR RESIDUE NAG B 301
14
BC5
SOFTWARE
NAG B:301 , NAG B:303 , ASP F:39 , ASN F:41 , VAL F:43
BINDING SITE FOR RESIDUE FUC B 302
15
BC6
SOFTWARE
NAG B:301 , FUC B:302 , BMA B:304 , XYP B:306 , ASP F:39 , ASN F:41
BINDING SITE FOR RESIDUE NAG B 303
16
BC7
SOFTWARE
NAG B:303 , MAN B:305 , XYP B:306 , ASN D:15
BINDING SITE FOR RESIDUE BMA B 304
17
BC8
SOFTWARE
BMA B:304 , XYP B:306 , ASN D:15 , PRO D:17 , HOH D:418
BINDING SITE FOR RESIDUE MAN B 305
18
BC9
SOFTWARE
NAG B:303 , BMA B:304 , MAN B:305
BINDING SITE FOR RESIDUE XYP B 306
19
CC1
SOFTWARE
ASP C:129 , TYR C:131 , ASN C:133 , ASP C:138 , HOH C:257 , HOH C:354
BINDING SITE FOR RESIDUE CA C 266
20
CC2
SOFTWARE
GLU C:127 , ASP C:129 , ASP C:138 , HIS C:143 , HOH C:264 , HOH C:271
BINDING SITE FOR RESIDUE MN C 267
21
CC3
SOFTWARE
LYS C:168 , VAL C:169 , LEU C:170 , ALA C:183 , VAL D:181
BINDING SITE FOR RESIDUE GOL C 283
22
CC4
SOFTWARE
ASN B:18 , THR C:4 , ASP C:5 , PRO C:57 , ILE C:58 , ASN C:59 , SER C:236 , LEU C:238
BINDING SITE FOR RESIDUE ABU C 282
23
CC5
SOFTWARE
ASN C:118 , SER C:120 , FUC C:302 , NAG C:303 , ASN G:41 , VAL G:43
BINDING SITE FOR RESIDUE NAG C 301
24
CC6
SOFTWARE
NAG C:301 , NAG C:303 , ASP G:39 , ASN G:41
BINDING SITE FOR RESIDUE FUC C 302
25
CC7
SOFTWARE
NAG C:301 , FUC C:302 , BMA C:304 , ASN G:41
BINDING SITE FOR RESIDUE NAG C 303
26
CC8
SOFTWARE
NAG C:303 , SER H:99
BINDING SITE FOR RESIDUE BMA C 304
27
CC9
SOFTWARE
ASP D:129 , TYR D:131 , ASN D:133 , ASP D:138 , HOH D:293 , HOH D:359
BINDING SITE FOR RESIDUE CA D 268
28
DC1
SOFTWARE
GLU D:127 , ASP D:129 , ASP D:138 , HIS D:143 , HOH D:246 , HOH D:256
BINDING SITE FOR RESIDUE MN D 269
29
DC2
SOFTWARE
LYS D:168 , VAL D:169 , LEU D:170 , ALA D:183
BINDING SITE FOR RESIDUE GOL D 285
30
DC3
SOFTWARE
THR A:8 , PHE A:9 , LYS A:13 , GLN A:16 , ASN A:18 , HOH A:453 , ASN D:3 , THR D:4 , ASP D:5 , ASN D:59 , TRP D:208
BINDING SITE FOR RESIDUE ABU D 278
31
DC4
SOFTWARE
ASN D:118 , SER D:120
BINDING SITE FOR RESIDUE NAG D 301
32
DC9
SOFTWARE
ASN A:41 , VAL A:43 , ASN E:118 , SER E:120 , FUC E:302 , NAG E:303
BINDING SITE FOR RESIDUE NAG E 301
33
EC1
SOFTWARE
ASN A:41 , NAG E:301 , NAG E:303
BINDING SITE FOR RESIDUE FUC E 302
34
EC2
SOFTWARE
ASN A:41 , HOH A:586 , NAG E:301 , FUC E:302 , BMA E:304
BINDING SITE FOR RESIDUE NAG E 303
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
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Sorry, no Info available
[
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PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3usua_ (A:)
1b: SCOP_d3usuc_ (C:)
1c: SCOP_d3usue_ (E:)
1d: SCOP_d3usug_ (G:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Concanavalin A-like lectins/glucanases
(797)
Superfamily
:
Concanavalin A-like lectins/glucanases
(797)
Family
:
Legume lectins
(238)
Protein domain
:
automated matches
(63)
Butea monosperma [TaxId: 56060]
(2)
1a
d3usua_
A:
1b
d3usuc_
C:
1c
d3usue_
E:
1d
d3usug_
G:
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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