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3UQG
Asym. Unit
Info
Asym.Unit (182 KB)
Biol.Unit 1 (92 KB)
Biol.Unit 2 (88 KB)
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(1)
Title
:
C-SRC KINASE DOMAIN IN COMPLEX WITH BUMPLESS BKI ANALOG UW1243
Authors
:
E. A. Merritt, E. T. Larson
Date
:
20 Nov 11 (Deposition) - 14 Mar 12 (Release) - 18 Apr 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Tyrosine Protein Kinase, Atp-Binding, Kinase Domain, Transferase- Transferase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. T. Larson, K. K. Ojo, R. C. Murphy, S. M. Johnson, Z. Zhang, J. E. Kim, D. J. Leibly, A. M. Fox, M. C. Reid, E. J. Dale, B. G. Perera, J. Kim, S. N. Hewitt, W. G. Hol, C. L. Verlinde, E. Fan, W. C. Van Voorhis, D. J. Maly, E. A. Merritt
Multiple Determinants For Selective Inhibition Of Apicomplexan Calcium-Dependent Protein Kinase Cdpk1.
J. Med. Chem. V. 55 2803 2012
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: 1-(PIPERIDIN-4-YLMETHYL)-1H-PYRAZO... (B5Aa)
1b: 1-(PIPERIDIN-4-YLMETHYL)-1H-PYRAZO... (B5Ab)
View:
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Label:
No.
Name
Count
Type
Full Name
1
B5A
2
Ligand/Ion
1-(PIPERIDIN-4-YLMETHYL)-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-AMINE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA A:293 , THR A:338 , GLU A:339 , TYR A:340 , MET A:341 , ASP A:348 , LEU A:393
BINDING SITE FOR RESIDUE B5A A 1
2
AC2
SOFTWARE
LEU B:273 , VAL B:281 , ALA B:293 , GLU B:339 , TYR B:340 , MET B:341 , LEU B:393
BINDING SITE FOR RESIDUE B5A B 1
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:273-295,B:273-295)
2: PROTEIN_KINASE_TYR (A:382-394,B:382-394)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
SRC_CHICK
273-295
2
A:273-295
B:273-295
2
PROTEIN_KINASE_TYR
PS00109
Tyrosine protein kinases specific active-site signature.
SRC_CHICK
382-394
2
A:382-394
B:382-394
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Exons
(6, 12)
Info
All Exons
Exon 1.6 (A:258-284 | B:256-284 (gaps))
Exon 1.7 (A:284-344 | B:284-344 (gaps))
Exon 1.8 (A:344-369 | B:344-369)
Exon 1.9 (A:370-411 | B:370-411)
Exon 1.10 (A:425-465 | B:425-465)
Exon 1.11b (A:465-533 | B:465-533)
View:
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All Exon Boundaries
1: Boundary 1.5/1.6
2: Boundary 1.6/1.7
3: Boundary 1.7/1.8
4: Boundary 1.8/1.9
5: Boundary 1.9/1.10
6: Boundary 1.10/1.11b
7: Boundary 1.11b/-
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSGALT00000006127
1
ENSGALE00000040081
chr20:
5036245-5036485
241
SRC_CHICK
1-81
81
0
-
-
1.2
ENSGALT00000006127
2
ENSGALE00000040077
chr20:
5036656-5036755
100
SRC_CHICK
81-114
34
0
-
-
1.3
ENSGALT00000006127
3
ENSGALE00000040071
chr20:
5039208-5039306
99
SRC_CHICK
114-147
34
0
-
-
1.4
ENSGALT00000006127
4
ENSGALE00000040076
chr20:
5039773-5039876
104
SRC_CHICK
147-182
36
0
-
-
1.5
ENSGALT00000006127
5
ENSGALE00000040075
chr20:
5040899-5041048
150
SRC_CHICK
182-232
51
0
-
-
1.6
ENSGALT00000006127
6
ENSGALE00000040079
chr20:
5041450-5041605
156
SRC_CHICK
232-284
53
2
A:258-284
B:256-284 (gaps)
27
29
1.7
ENSGALT00000006127
7
ENSGALE00000040078
chr20:
5041714-5041893
180
SRC_CHICK
284-344
61
2
A:284-344
B:284-344 (gaps)
61
61
1.8
ENSGALT00000006127
8
ENSGALE00000040074
chr20:
5041971-5042047
77
SRC_CHICK
344-369
26
2
A:344-369
B:344-369
26
26
1.9
ENSGALT00000006127
9
ENSGALE00000040080
chr20:
5042182-5042335
154
SRC_CHICK
370-421
52
2
A:370-411
B:370-411
42
42
1.10
ENSGALT00000006127
10
ENSGALE00000040072
chr20:
5042454-5042585
132
SRC_CHICK
421-465
45
2
A:425-465
B:425-465
41
41
1.11b
ENSGALT00000006127
11b
ENSGALE00000040073
chr20:
5042664-5042872
209
SRC_CHICK
465-533
69
2
A:465-533
B:465-533
69
69
[
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3uqga_ (A:)
1b: SCOP_d3uqgb_ (B:)
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
c-src tyrosine kinase
(46)
Chicken (Gallus gallus) [TaxId: 9031]
(34)
1a
d3uqga_
A:
1b
d3uqgb_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (182 KB)
Header - Asym.Unit
Biol.Unit 1 (92 KB)
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