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3UIT
Asym. Unit
Info
Asym.Unit (380 KB)
Biol.Unit 1 (98 KB)
Biol.Unit 2 (94 KB)
Biol.Unit 3 (94 KB)
Biol.Unit 4 (96 KB)
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(1)
Title
:
OVERALL STRUCTURE OF PATJ/PALS1/MALS COMPLEX
Authors
:
J. Zhang, X. Yang, J. Long, Y. Shen
Date
:
06 Nov 11 (Deposition) - 22 Feb 12 (Release) - 03 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.05
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
L27 Domain, Cell Polarization, Cell Adhesion
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Zhang, X. Yang, Z. Wang, H. Zhou, X. Xie, Y. Shen, J. Long
Structure Of An L27 Domain Heterotrimer From Cell Polarity Complex Patj/Pals1/Mals2 Reveals Mutually Independent L27 Domain Assembly Mode
J. Biol. Chem. V. 287 11132 2012
[
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Hetero Components
(1, 20)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
1e: ACETATE ION (ACTe)
1f: ACETATE ION (ACTf)
1g: ACETATE ION (ACTg)
1h: ACETATE ION (ACTh)
1i: ACETATE ION (ACTi)
1j: ACETATE ION (ACTj)
1k: ACETATE ION (ACTk)
1l: ACETATE ION (ACTl)
1m: ACETATE ION (ACTm)
1n: ACETATE ION (ACTn)
1o: ACETATE ION (ACTo)
1p: ACETATE ION (ACTp)
1q: ACETATE ION (ACTq)
1r: ACETATE ION (ACTr)
1s: ACETATE ION (ACTs)
1t: ACETATE ION (ACTt)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
20
Ligand/Ion
ACETATE ION
[
close Hetero Component info
]
Sites
(19, 19)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ALA B:236 , ARG B:239 , ASP D:17 , ARG D:20 , TYR D:39 , HOH D:277
BINDING SITE FOR RESIDUE ACT D 1428
02
AC2
SOFTWARE
PRO B:137 , PHE B:138 , ARG B:244 , HOH B:274 , GLU D:40 , PRO D:76 , VAL D:77 , HOH D:332
BINDING SITE FOR RESIDUE ACT B 1428
03
AC3
SOFTWARE
PRO A:137 , PHE A:138 , ARG A:244 , GLU C:40 , PRO C:76 , VAL C:77 , HOH C:306
BINDING SITE FOR RESIDUE ACT A 1428
04
AC4
SOFTWARE
LYS B:9 , ASP B:17 , ARG B:20 , TYR B:39 , HOH B:305 , ALA D:236 , ARG D:239
BINDING SITE FOR RESIDUE ACT B 266
05
AC5
SOFTWARE
GLU B:40 , VAL B:77 , PRO D:137 , PHE D:138 , ARG D:244 , HOH D:330
BINDING SITE FOR RESIDUE ACT B 267
06
AC6
SOFTWARE
ALA A:236 , ARG A:239 , ASP C:17 , ARG C:20 , TYR C:39 , HOH C:323
BINDING SITE FOR RESIDUE ACT C 1428
07
AC7
SOFTWARE
LYS A:9 , ASP A:17 , ARG A:20 , TYR A:39 , HOH A:301 , ALA C:236 , ARG C:239
BINDING SITE FOR RESIDUE ACT A 266
08
AC8
SOFTWARE
GLU B:251 , HOH B:313 , HOH B:402 , HOH B:582
BINDING SITE FOR RESIDUE ACT B 268
09
AC9
SOFTWARE
LYS A:133 , GLU A:251 , HOH A:311 , HOH A:413 , HOH A:745
BINDING SITE FOR RESIDUE ACT A 267
10
BC1
SOFTWARE
GLU C:251 , HOH C:305 , HOH C:311
BINDING SITE FOR RESIDUE ACT C 266
11
BC2
SOFTWARE
GLU D:251 , HOH D:448
BINDING SITE FOR RESIDUE ACT D 266
12
BC3
SOFTWARE
GLN A:63 , LEU A:64 , SER A:65 , ILE A:123 , ALA A:126
BINDING SITE FOR RESIDUE ACT A 268
13
BC4
SOFTWARE
GLN A:63 , GLN D:63 , LEU D:64 , SER D:65 , ILE D:123
BINDING SITE FOR RESIDUE ACT D 267
14
BC5
SOFTWARE
GLN A:164 , GLU A:165
BINDING SITE FOR RESIDUE ACT A 270
15
BC6
SOFTWARE
VAL A:204 , GLY A:208 , ARG A:211 , ASP A:212 , HOH A:464 , GLN C:110
BINDING SITE FOR RESIDUE ACT A 271
16
BC7
SOFTWARE
SER A:214 , LEU A:241 , GLN A:242 , ARG A:250 , HOH A:369 , HOH A:541
BINDING SITE FOR RESIDUE ACT A 272
17
BC8
SOFTWARE
ASN B:171 , HOH B:277 , HIS D:159 , GLN D:164 , HOH D:902
BINDING SITE FOR RESIDUE ACT D 268
18
BC9
SOFTWARE
SER D:226
BINDING SITE FOR RESIDUE ACT D 269
19
CC1
SOFTWARE
LYS B:9 , ILE D:141 , LYS D:233 , HOH D:405
BINDING SITE FOR RESIDUE ACT B 269
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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]
PROSITE Patterns/Profiles
(4, 40)
Info
All PROSITE Patterns/Profiles
1: L27 (A:78-135,B:78-135,C:78-135,D:78-13...)
2: PDZ (A:82-110,B:82-110,C:82-110,D:82-11...)
3: SH3 (A:225-232,B:225-232,C:225-232,D:22...)
4: GUANYLATE_KINASE_2 (A:244-261,B:244-261,C:244-261,D:24...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
L27
PS51022
L27 domain profile.
MPP5_HUMAN
120-177
179-235
8
A:78-135
B:78-135
C:78-135
D:78-135
A:137-190
B:137-190
C:137-190
D:137-190
2
PDZ
PS50106
PDZ domain profile.
INADL_MOUSE
134-221
248-328
365-453
555-641
688-766
1074-1166
1245-1328
1472-1555
1568-1650
1709-1795
20
A:82-110
B:82-110
C:82-110
D:82-110
A:116-131
B:116-131
C:116-131
D:116-131
A:141-155
B:141-155
C:141-155
D:141-155
A:189-197
B:189-197
C:189-197
D:189-197
A:217-240
B:217-240
C:217-240
D:217-240
-
-
-
-
-
MPP5_HUMAN
256-336
4
A:191-220
B:191-220
C:191-220
D:191-220
3
SH3
PS50002
Src homology 3 (SH3) domain profile.
MPP5_HUMAN
345-417
4
A:225-232
B:225-232
C:225-232
D:225-232
4
GUANYLATE_KINASE_2
PS50052
Guanylate kinase-like domain profile.
MPP5_HUMAN
479-660
4
A:244-261
B:244-261
C:244-261
D:244-261
[
close PROSITE info
]
Exons
(10, 40)
Info
All Exons
Exon 1.3 (A:8-81 (gaps) | B:9-81 (gaps) | C:...)
Exon 1.4 (A:81-150 | B:81-150 | C:81-150 | D...)
Exon 1.5 (A:151-176 | B:151-176 | C:151-176 ...)
Exon 1.6 (A:177-190 | B:177-190 | C:177-190 ...)
Exon 1.7 (A:191-220 (gaps) | B:191-220 (gaps...)
Exon 1.8 (A:221-224 | B:221-224 | C:221-224 ...)
Exon 1.9 (A:225-231 (gaps) | B:225-231 (gaps...)
Exon 1.10 (A:232-243 | B:232-243 | C:232-243 ...)
Exon 1.12 (A:244-249 | B:244-249 | C:244-249 ...)
Exon 1.13 (A:250-263 (gaps) | B:250-261 (gaps...)
View:
Select:
Label:
All Exon Boundaries
01: Boundary 1.2/1.3
02: Boundary 1.3/1.4
03: Boundary 1.4/1.5
04: Boundary 1.5/1.6
05: Boundary 1.6/1.7
06: Boundary 1.7/1.8
07: Boundary 1.8/1.9
08: Boundary 1.9/1.10
09: Boundary 1.10/1.11
10: Boundary 1.11/1.12
11: Boundary 1.12/1.13
12: Boundary 1.13/1.14
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000261681
1
ENSE00001246818
chr14:
67708021-67708250
230
MPP5_HUMAN
-
0
0
-
-
1.2
ENST00000261681
2
ENSE00001246811
chr14:
67736418-67736500
83
MPP5_HUMAN
-
0
0
-
-
1.3
ENST00000261681
3
ENSE00001246806
chr14:
67745735-67746254
520
MPP5_HUMAN
1-123
123
4
A:8-81 (gaps)
B:9-81 (gaps)
C:9-81 (gaps)
D:8-81 (gaps)
107
117
117
107
1.4
ENST00000261681
4
ENSE00001140603
chr14:
67759228-67759436
209
MPP5_HUMAN
123-192
70
4
A:81-150
B:81-150
C:81-150
D:81-150
70
70
70
70
1.5
ENST00000261681
5
ENSE00000658572
chr14:
67768106-67768183
78
MPP5_HUMAN
193-218
26
4
A:151-176
B:151-176
C:151-176
D:151-176
26
26
26
26
1.6
ENST00000261681
6
ENSE00000658574
chr14:
67768689-67768835
147
MPP5_HUMAN
219-267
49
4
A:177-190
B:177-190
C:177-190
D:177-190
14
14
14
14
1.7
ENST00000261681
7
ENSE00000444379
chr14:
67769127-67769288
162
MPP5_HUMAN
268-321
54
4
A:191-220 (gaps)
B:191-220 (gaps)
C:191-220 (gaps)
D:191-220 (gaps)
36
36
36
36
1.8
ENST00000261681
8
ENSE00000807762
chr14:
67770239-67770316
78
MPP5_HUMAN
322-347
26
4
A:221-224
B:221-224
C:221-224
D:221-224
4
4
4
4
1.9
ENST00000261681
9
ENSE00000658576
chr14:
67779244-67779427
184
MPP5_HUMAN
348-409
62
4
A:225-231 (gaps)
B:225-231 (gaps)
C:225-231 (gaps)
D:225-231 (gaps)
15
15
15
15
1.10
ENST00000261681
10
ENSE00000658577
chr14:
67783549-67783620
72
MPP5_HUMAN
409-433
25
4
A:232-243
B:232-243
C:232-243
D:232-243
12
12
12
12
1.11
ENST00000261681
11
ENSE00000658578
chr14:
67784125-67784196
72
MPP5_HUMAN
433-457
25
0
-
-
1.12
ENST00000261681
12
ENSE00000522816
chr14:
67786947-67787114
168
MPP5_HUMAN
457-513
57
4
A:244-249
B:244-249
C:244-249
D:244-249
6
6
6
6
1.13
ENST00000261681
13
ENSE00000658580
chr14:
67787774-67787976
203
MPP5_HUMAN
513-580
68
4
A:250-263 (gaps)
B:250-261 (gaps)
C:250-263 (gaps)
D:250-264 (gaps)
31
29
31
32
1.14
ENST00000261681
14
ENSE00000658581
chr14:
67790419-67790529
111
MPP5_HUMAN
581-617
37
0
-
-
1.15
ENST00000261681
15
ENSE00001304885
chr14:
67799497-67802535
3039
MPP5_HUMAN
618-675
58
0
-
-
[
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SCOP Domains
(0, 0)
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CATH Domains
(0, 0)
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all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
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all PFAM domains
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Sorry, no Info available
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