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Biol.Unit 1 (100 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN SURVIVIN K62Y/H80W MUTANT IN COMPLEX WITH SMAC/DIABLO(1-15) PEPTIDE
Authors
:
J. Du, D. J. Patel
Date
:
04 Nov 11 (Deposition) - 01 Feb 12 (Release) - 01 Feb 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.71
Chains
:
Asym. Unit : A,B,P,Q
Biol. Unit 1: A,B,P,Q (1x)
Keywords
:
Bir Domain, Mitosis, T3 Phosphorylated H3 Binding, Smac/Diablo Binding, Apoptosis-Apoptosis Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Du, A. E. Kelly, H. Funabiki, D. J. Patel
Structural Basis For Recognition Of H3T3Ph And Smac/Diablo N-Terminal Peptides By Human Survivin.
Structure V. 20 185 2012
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Hetero Components
(1, 2)
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All Hetero Components
1a: ZINC ION (ZNa)
1b: ZINC ION (ZNb)
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No.
Name
Count
Type
Full Name
1
ZN
2
Ligand/Ion
ZINC ION
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:57 , CYS A:60 , HIS A:77 , CYS A:84
BINDING SITE FOR RESIDUE ZN A 341
2
AC2
SOFTWARE
CYS B:57 , CYS B:60 , HIS B:77 , CYS B:84
BINDING SITE FOR RESIDUE ZN B 341
3
AC3
SOFTWARE
GLU A:51 , TYR A:62 , LEU A:64 , GLU A:65 , GLY A:66 , TRP A:67 , ASP A:71 , GLU A:76 , TRP A:80
BINDING SITE FOR CHAIN P OF DIABLO HOMOLOG, MITOCHONDRIAL
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SAPs(SNPs)/Variants
(1, 2)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_021071 (K129E, chain A/B, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_021071
K
129
E
BIRC5_HUMAN
Polymorphism
2071214
A/B
K
129
E
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: BIR_REPEAT_2 (A:18-88,B:18-88)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
BIR_REPEAT_2
PS50143
BIR repeat profile.
BIRC5_HUMAN
18-88
2
A:18-88
B:18-88
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Exons
(4, 8)
Info
All Exons
Exon 1.1a (A:5-37 | B:5-37)
Exon 1.2 (A:38-74 | B:38-74)
Exon 1.4 (A:74-113 | B:74-113)
Exon 1.6 (A:114-140 | B:114-140)
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1: Boundary -/1.1a
2: Boundary 1.1a/1.2
3: Boundary 1.2/1.4
4: Boundary 1.4/1.6
5: Boundary 1.6/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000350051
1a
ENSE00001305879
chr17:
76210277-76210508
232
BIRC5_HUMAN
1-37
37
2
A:5-37
B:5-37
33
33
1.2
ENST00000350051
2
ENSE00001118173
chr17:
76210761-76210870
110
BIRC5_HUMAN
38-74
37
2
A:38-74
B:38-74
37
37
1.4
ENST00000350051
4
ENSE00000905203
chr17:
76212745-76212862
118
BIRC5_HUMAN
74-113
40
2
A:74-113
B:74-113
40
40
1.6
ENST00000350051
6
ENSE00001706950
chr17:
76219546-76221715
2170
BIRC5_HUMAN
114-142
29
2
A:114-140
B:114-140
27
27
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SCOP Domains
(0, 0)
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CATH Domains
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