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3UF9
Biol. Unit 2
Info
Asym.Unit (429 KB)
Biol.Unit 1 (212 KB)
Biol.Unit 2 (214 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF SSOPOX IN COMPLEX WITH THE PHOSPHOTRIESTER FENSULFOTHION
Authors
:
M. Elias, G. Gotthard, J. Hiblot, E. Chabriere
Date
:
31 Oct 11 (Deposition) - 03 Oct 12 (Release) - 06 Nov 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.68
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Keywords
:
(Beta/Alpha)8-Hydrolase, Lactonase, Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
J. Hiblot, G. Gotthard, E. Chabriere, M. Elias
Characterisation Of The Organophosphate Hydrolase Catalytic Activity Of Ssopox
Sci Rep V. 2 779 2012
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Hetero Components
(4, 7)
Info
All Hetero Components
1a: COBALT (II) ION (COa)
1b: COBALT (II) ION (COb)
1c: COBALT (II) ION (COc)
1d: COBALT (II) ION (COd)
2a: FE (II) ION (FE2a)
2b: FE (II) ION (FE2b)
2c: FE (II) ION (FE2c)
2d: FE (II) ION (FE2d)
3a: O,O-DIETHYL O-{4-[(R)-METHYLSULFIN... (FSTa)
3b: O,O-DIETHYL O-{4-[(R)-METHYLSULFIN... (FSTb)
3c: O,O-DIETHYL O-{4-[(R)-METHYLSULFIN... (FSTc)
3d: O,O-DIETHYL O-{4-[(R)-METHYLSULFIN... (FSTd)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
5a: LYSINE NZ-CARBOXYLIC ACID (KCXa)
5b: LYSINE NZ-CARBOXYLIC ACID (KCXb)
5c: LYSINE NZ-CARBOXYLIC ACID (KCXc)
5d: LYSINE NZ-CARBOXYLIC ACID (KCXd)
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No.
Name
Count
Type
Full Name
1
CO
-1
Ligand/Ion
COBALT (II) ION
2
FE2
2
Ligand/Ion
FE (II) ION
3
FST
2
Ligand/Ion
O,O-DIETHYL O-{4-[(R)-METHYLSULFINYL]PHENYL}PHOSPHOROTHIOATE
4
GOL
1
Ligand/Ion
GLYCEROL
5
KCX
2
Mod. Amino Acid
LYSINE NZ-CARBOXYLIC ACID
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Sites
(8, 8)
Info
All Sites
1: AC5 (SOFTWARE)
2: AC6 (SOFTWARE)
3: AC7 (SOFTWARE)
4: AC8 (SOFTWARE)
5: AC9 (SOFTWARE)
6: BC4 (SOFTWARE)
7: BC5 (SOFTWARE)
8: BC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC5
SOFTWARE
GLN A:58 , PHE A:59 , PHE B:59 , PHE B:284
BINDING SITE FOR RESIDUE GOL A 319
2
AC6
SOFTWARE
HIS B:22 , HIS B:24 , KCX B:137 , ASP B:256 , CO B:316 , FST B:317 , HOH B:363 , HOH B:367
BINDING SITE FOR RESIDUE FE2 B 315
3
AC7
SOFTWARE
KCX B:137 , HIS B:170 , HIS B:199 , FE2 B:315 , HOH B:363 , HOH B:367
BINDING SITE FOR RESIDUE CO B 316
4
AC8
SOFTWARE
HIS B:24 , KCX B:137 , ARG B:223 , LEU B:226 , LEU B:228 , PHE B:229 , ASP B:256 , ILE B:261 , ALA B:266 , FE2 B:315 , HOH B:363 , HOH B:367
BINDING SITE FOR RESIDUE FST B 317
5
AC9
SOFTWARE
ALA B:173 , HIS B:174 , ASN B:175 , ASN B:176 , ASN B:205 , TYR B:208
BINDING SITE FOR RESIDUE GOL B 318
6
BC4
SOFTWARE
HIS D:22 , HIS D:24 , KCX D:137 , ASP D:256 , CO D:316 , FST D:317 , HOH D:349
BINDING SITE FOR RESIDUE FE2 D 315
7
BC5
SOFTWARE
KCX D:137 , HIS D:170 , HIS D:199 , FE2 D:315 , HOH D:345 , HOH D:349
BINDING SITE FOR RESIDUE CO D 316
8
BC6
SOFTWARE
HIS D:24 , ARG D:223 , PHE D:229 , ASP D:256 , CYS D:258 , TRP D:263 , THR D:265 , FE2 D:315 , HOH D:331
BINDING SITE FOR RESIDUE FST D 317
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: PHOSPHOTRIESTERASE_2 (B:2-314,D:2-314)
2: PHOSPHOTRIESTERASE_1 (B:17-25,D:17-25)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PHOSPHOTRIESTERASE_2
PS51347
Phosphotriesterase family profile.
PHP_SULSO
2-314
2
-
B:2-314
-
D:2-314
2
PHOSPHOTRIESTERASE_1
PS01322
Phosphotriesterase family signature 1.
PHP_SULSO
17-25
2
-
B:17-25
-
D:17-25
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3uf9a_ (A:)
1b: SCOP_d3uf9b_ (B:)
1c: SCOP_d3uf9c_ (C:)
1d: SCOP_d3uf9d_ (D:)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Metallo-dependent hydrolases
(273)
Family
:
automated matches
(44)
Protein domain
:
automated matches
(44)
Sulfolobus solfataricus [TaxId: 2287]
(10)
1a
d3uf9a_
A:
1b
d3uf9b_
B:
1c
d3uf9c_
C:
1d
d3uf9d_
D:
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (429 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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