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3U9C
Biol. Unit 2
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Asym.Unit (247 KB)
Biol.Unit 1 (123 KB)
Biol.Unit 2 (122 KB)
Biol.Unit 3 (241 KB)
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(1)
Title
:
STRUCTURE OF A C-TERMINAL DELETION MUTANT OF HUMAN PROTEIN KINASE CK2 CATALYTIC SUBUNIT WITH THE ATP-COMPETITIVE INHIBITOR RESORUFIN
Authors
:
K. Klopffleisch, O. -G. Issinger, K. Niefind
Date
:
18 Oct 11 (Deposition) - 30 May 12 (Release) - 23 Jan 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (1x)
Keywords
:
Protein Kinase Ck2 Casein Kinase 2, Eukaryotic Protein Kinase Fold, Atp:Protein Phosphotransferase, Protein Kinase, Atp Ck2Beta, Transferase-Transferase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Klopffleisch, O. G. Issinger, K. Niefind
Low-Density Crystal Packing Of Human Protein Kinase Ck2 Catalytic Subunit In Complex With Resorufin Or Other Ligands: A Tool To Study The Unique Hinge-Region Plasticity Of The Enzyme Without Packing Bias.
Acta Crystallogr. , Sect. D V. 68 883 2012
(for further references see the
PDB file header
)
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Hetero Components
(3, 7)
Info
All Hetero Components
1a: 7-HYDROXY-3H-PHENOXAZIN-3-ONE (04Ga)
1b: 7-HYDROXY-3H-PHENOXAZIN-3-ONE (04Gb)
2a: CHLORIDE ION (CLa)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
3c: GLYCEROL (GOLc)
3d: GLYCEROL (GOLd)
3e: GLYCEROL (GOLe)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
4e: SULFATE ION (SO4e)
4f: SULFATE ION (SO4f)
4g: SULFATE ION (SO4g)
View:
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Label:
No.
Name
Count
Type
Full Name
1
04G
1
Ligand/Ion
7-HYDROXY-3H-PHENOXAZIN-3-ONE
2
CL
-1
Ligand/Ion
CHLORIDE ION
3
GOL
2
Ligand/Ion
GLYCEROL
4
SO4
4
Ligand/Ion
SULFATE ION
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Sites
(8, 8)
Info
All Sites
1: AC3 (SOFTWARE)
2: AC9 (SOFTWARE)
3: BC1 (SOFTWARE)
4: BC2 (SOFTWARE)
5: BC3 (SOFTWARE)
6: BC4 (SOFTWARE)
7: BC5 (SOFTWARE)
8: BC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC3
SOFTWARE
SER A:277 , ARG A:278 , SER B:277 , ARG B:278
BINDING SITE FOR RESIDUE SO4 A 403
2
AC9
SOFTWARE
LYS B:77 , ARG B:80 , ARG B:155 , ASN B:189
BINDING SITE FOR RESIDUE SO4 B 401
3
BC1
SOFTWARE
LYS A:74 , TRP B:33 , LYS B:102 , HOH B:522
BINDING SITE FOR RESIDUE SO4 B 402
4
BC2
SOFTWARE
ARG B:280 , ARG B:283
BINDING SITE FOR RESIDUE SO4 B 403
5
BC3
SOFTWARE
ARG B:191 , LYS B:198 , ASN B:238
BINDING SITE FOR RESIDUE SO4 B 404
6
BC4
SOFTWARE
VAL B:66 , LYS B:68 , PHE B:113 , VAL B:116 , ASN B:118 , ASP B:175
BINDING SITE FOR RESIDUE 04G B 405
7
BC5
SOFTWARE
GLU A:282 , VAL A:293 , ASP B:299 , LYS B:303
BINDING SITE FOR RESIDUE GOL B 406
8
BC6
SOFTWARE
ARG B:275 , HIS B:276 , SER B:277 , LYS B:279
BINDING SITE FOR RESIDUE GOL B 407
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SAPs(SNPs)/Variants
(4, 4)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_077045 (R47Q, chain B, )
2: VAR_077046 (Y50S, chain B, )
3: VAR_077047 (D175G, chain B, )
4: VAR_077048 (K198R, chain B, )
View:
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_077045
R
47
Q
CSK21_HUMAN
Disease (OCNDS)
869312845
B
R
47
Q
2
UniProt
VAR_077046
Y
50
S
CSK21_HUMAN
Disease (OCNDS)
869312849
B
Y
50
S
3
UniProt
VAR_077047
D
175
G
CSK21_HUMAN
Disease (OCNDS)
869312848
B
D
175
G
4
UniProt
VAR_077048
K
198
R
CSK21_HUMAN
Disease (OCNDS)
869312840
B
K
198
R
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (B:45-68)
2: PROTEIN_KINASE_ST (B:152-164)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
CSK21_HUMAN
45-68
1
-
B:45-68
2
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
CSK21_HUMAN
152-164
1
-
B:152-164
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(0, 0)
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CATH Domains
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Pfam Domains
(0, 0)
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Chain B
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (247 KB)
Header - Asym.Unit
Biol.Unit 1 (123 KB)
Header - Biol.Unit 1
Biol.Unit 2 (122 KB)
Header - Biol.Unit 2
Biol.Unit 3 (241 KB)
Header - Biol.Unit 3
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