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3U95
Asym. Unit
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Asym.Unit (525 KB)
Biol.Unit 1 (178 KB)
Biol.Unit 2 (178 KB)
Biol.Unit 3 (176 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A PUTATIVE ALPHA-GLUCOSIDASE FROM THERMOTOGA NEAPOLITANA
Authors
:
N. C. Ha, S. Y. Jun, B. Y. Yun, B. Y. Yoon, S. Piao
Date
:
17 Oct 11 (Deposition) - 26 Sep 12 (Release) - 26 Sep 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Keywords
:
Hydrolysis, Cytosol, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. Y. Yun, S. Y. Jun, N. A. Kim, B. Y. Yoon, S. Piao, S. H. Park, S. H. Jeong, H. Lee, N. C. Ha
Crystal Structure And Thermostability Of A Putative Alpha-Glucosidase From Thermotoga Neapolitana
Biochem. Biophys. Res. Commun. V. 416 92 2011
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Hetero Components
(1, 6)
Info
All Hetero Components
1a: MANGANESE (II) ION (MNa)
1b: MANGANESE (II) ION (MNb)
1c: MANGANESE (II) ION (MNc)
1d: MANGANESE (II) ION (MNd)
1e: MANGANESE (II) ION (MNe)
1f: MANGANESE (II) ION (MNf)
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No.
Name
Count
Type
Full Name
1
MN
6
Ligand/Ion
MANGANESE (II) ION
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:181 , HIS A:210 , HOH A:1014
BINDING SITE FOR RESIDUE MN A 601
2
AC2
SOFTWARE
CYS B:181 , HIS B:210 , HOH B:1396
BINDING SITE FOR RESIDUE MN B 602
3
AC3
SOFTWARE
CYS C:181 , HIS C:210 , HOH C:1567 , HOH C:1574 , HOH C:2182
BINDING SITE FOR RESIDUE MN C 500
4
AC4
SOFTWARE
CYS D:181 , HIS D:210 , HOH D:1377
BINDING SITE FOR RESIDUE MN D 600
5
AC5
SOFTWARE
CYS E:181 , HIS E:210 , HOH E:1092 , HOH E:1575
BINDING SITE FOR RESIDUE MN E 600
6
AC6
SOFTWARE
CYS F:181 , HIS F:210 , ASP F:267
BINDING SITE FOR RESIDUE MN F 600
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 12)
Info
All SCOP Domains
1a: SCOP_d3u95a2 (A:192-468)
1b: SCOP_d3u95b2 (B:192-469)
1c: SCOP_d3u95c2 (C:192-469)
1d: SCOP_d3u95d2 (D:192-468)
1e: SCOP_d3u95e2 (E:192-469)
1f: SCOP_d3u95f2 (F:192-469)
2a: SCOP_d3u95a1 (A:1-191)
2b: SCOP_d3u95b1 (B:1-191)
2c: SCOP_d3u95c1 (C:2-191)
2d: SCOP_d3u95d1 (D:1-191)
2e: SCOP_d3u95e1 (E:1-191)
2f: SCOP_d3u95f1 (F:1-191)
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Protein Domains
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(
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Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
LDH C-terminal domain-like
(172)
Superfamily
:
LDH C-terminal domain-like
(172)
Family
:
AglA-like glucosidase
(9)
Protein domain
:
automated matches
(2)
Thermotoga neapolitana [TaxId: 309803]
(1)
1a
d3u95a2
A:192-468
1b
d3u95b2
B:192-469
1c
d3u95c2
C:192-469
1d
d3u95d2
D:192-468
1e
d3u95e2
E:192-469
1f
d3u95f2
F:192-469
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
NAD(P)-binding Rossmann-fold domains
(1604)
Superfamily
:
NAD(P)-binding Rossmann-fold domains
(1604)
Family
:
automated matches
(447)
Protein domain
:
automated matches
(447)
Thermotoga neapolitana [TaxId: 309803]
(1)
2a
d3u95a1
A:1-191
2b
d3u95b1
B:1-191
2c
d3u95c1
C:2-191
2d
d3u95d1
D:1-191
2e
d3u95e1
E:1-191
2f
d3u95f1
F:1-191
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CATH Domains
(0, 0)
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Pfam Domains
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Asym.Unit (525 KB)
Header - Asym.Unit
Biol.Unit 1 (178 KB)
Header - Biol.Unit 1
Biol.Unit 2 (178 KB)
Header - Biol.Unit 2
Biol.Unit 3 (176 KB)
Header - Biol.Unit 3
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