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3U8P
Biol. Unit 3
Info
Asym.Unit (362 KB)
Biol.Unit 1 (120 KB)
Biol.Unit 2 (120 KB)
Biol.Unit 3 (122 KB)
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(1)
Title
:
CYTOCHROME B562 INTEGRAL FUSION WITH EGFP
Authors
:
J. Arpino, H. Czapinska, A. Piasecka, W. R. Edwards, P. Barker, M. Gajda M. Bochtler, D. D. Jones
Date
:
17 Oct 11 (Deposition) - 29 Aug 12 (Release) - 05 Jul 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.75
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Keywords
:
Directed Evolution, Domain Insertion, Energy Transfer, Fluorescence Quenching, Fluorescent Protein, Electron Transport
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. A. Arpino, H. Czapinska, A. Piasecka, W. R. Edwards, P. Barker, M. J. Gajda, M. Bochtler, D. D. Jones
Structural Basis For Efficient Chromophore Communication An Energy Transfer In A Constructed Didomain Protein Scaffold.
J. Am. Chem. Soc. V. 134 13632 2012
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: {2-[(1R,2R)-1-AMINO-2-HYDROXYPROPY... (CROa)
1b: {2-[(1R,2R)-1-AMINO-2-HYDROXYPROPY... (CROb)
1c: {2-[(1R,2R)-1-AMINO-2-HYDROXYPROPY... (CROc)
2a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
2b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
2c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
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No.
Name
Count
Type
Full Name
1
CRO
1
Mod. Amino Acid
{2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4-HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC ACID
2
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
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Sites
(1, 1)
Info
All Sites
1: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC3
SOFTWARE
SER C:42 , GLU C:46 , MET C:49 , PRO C:87 , PHE C:103 , PHE C:107 , ARG C:140 , TYR C:143 , HIS C:144 , TYR C:147 , ARG C:148 , ARG C:181 , HOH C:355 , HOH C:382 , HOH C:404
BINDING SITE FOR RESIDUE HEM C 347
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SAPs(SNPs)/Variants
(4, 4)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_GFP_AEQVI_001 (F208Y, chain C, )
2: VAR_GFP_AEQVI_002 (T216S, chain C, )
3: VAR_GFP_AEQVI_003 (L249M, chain C, )
4: VAR_GFP_AEQVI_004 (V327I, chain C, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_GFP_AEQVI_001
*
F
100
Y
GFP_AEQVI
---
---
C
F
208
Y
2
UniProt
VAR_GFP_AEQVI_002
*
T
108
S
GFP_AEQVI
---
---
C
T
216
S
3
UniProt
VAR_GFP_AEQVI_003
*
L
141
M
GFP_AEQVI
---
---
C
L
249
M
4
UniProt
VAR_GFP_AEQVI_004
*
V
219
I
GFP_AEQVI
---
---
C
V
327
I
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(, 0)
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain C
Asymmetric Unit 1
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Asym.Unit (362 KB)
Header - Asym.Unit
Biol.Unit 1 (120 KB)
Header - Biol.Unit 1
Biol.Unit 2 (120 KB)
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Biol.Unit 3 (122 KB)
Header - Biol.Unit 3
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