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3U6H
Biol. Unit 2
Info
Asym.Unit (57 KB)
Biol.Unit 1 (52 KB)
Biol.Unit 2 (102 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF C-MET IN COMPLEX WITH PYRAZOLONE INHIBITOR 26
Authors
:
S. F. Bellon, D. A. Whittington, A. L. Long
Date
:
12 Oct 11 (Deposition) - 22 Feb 12 (Release) - 23 May 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Biol. Unit 2: A (2x)
Keywords
:
Kinase Domain, Phosphotransferase, Cancer, Hepatocyte Growth Factor, Hgf, Transferase-Transferase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. H. Norman, L. Liu, M. Lee, N. Xi, I. Fellows, N. D. D'Angelo, C. Dominguez, K. Rex, S. F. Bellon, T. S. Kim, I. Dussault
Structure-Based Design Of Novel Class Ii C-Met Inhibitors: 1. Identification Of Pyrazolone-Based Derivatives.
J. Med. Chem. V. 55 1858 2012
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: N-{4-[(6,7-DIMETHOXYQUINOLIN-4-YL)... (03Xa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
03X
2
Ligand/Ion
N-{4-[(6,7-DIMETHOXYQUINOLIN-4-YL)OXY]-3-FLUOROPHENYL}-1,5-DIMETHYL-3-OXO-2-PHENYL-2,3-DIHYDRO-1H-PYRAZOLE-4-CARBOXAMIDE
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:33 , HOH A:48 , ILE A:1084 , PHE A:1089 , VAL A:1092 , ALA A:1108 , PHE A:1124 , GLU A:1127 , MET A:1131 , LEU A:1140 , VAL A:1155 , LEU A:1157 , PRO A:1158 , TYR A:1159 , MET A:1160 , MET A:1211 , ALA A:1221 , ASP A:1222 , PHE A:1223
BINDING SITE FOR RESIDUE 03X A 1
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SAPs(SNPs)/Variants
(13, 26)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
01: VAR_032485 (V1092I, chain A, )
02: VAR_032486 (H1094L, chain A, )
03: VAR_032487 (H1094R, chain A, )
04: VAR_032488 (H1094Y, chain A, )
05: VAR_032489 (H1106D, chain A, )
06: VAR_006286 (M1131T, chain A, )
07: VAR_032490 (T1173I, chain A, )
08: VAR_006287 (V1188L, chain A, )
09: VAR_006288 (L1195V, chain A, )
10: VAR_006289 (V1220I, chain A, )
11: VAR_032493 (M1250I, chain A, )
12: VAR_006294 (M1250T, chain A, )
13: VAR_064857 (V1294I, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_032485
V
1092
I
MET_HUMAN
Disease (RCCP)
---
A
V
1092
I
02
UniProt
VAR_032486
H
1094
L
MET_HUMAN
Disease (RCCP)
---
A
H
1094
L
03
UniProt
VAR_032487
H
1094
R
MET_HUMAN
Disease (RCCP)
---
A
H
1094
R
04
UniProt
VAR_032488
H
1094
Y
MET_HUMAN
Disease (RCCP)
---
A
H
1094
Y
05
UniProt
VAR_032489
H
1106
D
MET_HUMAN
Disease (RCCP)
---
A
H
1106
D
06
UniProt
VAR_006286
M
1131
T
MET_HUMAN
Disease (RCCP)
---
A
M
1131
T
07
UniProt
VAR_032490
T
1173
I
MET_HUMAN
Disease (HCC)
---
A
T
1173
I
08
UniProt
VAR_006287
V
1188
L
MET_HUMAN
Disease (RCCP)
---
A
V
1188
L
09
UniProt
VAR_006288
L
1195
V
MET_HUMAN
Disease (RCCP)
---
A
L
1195
V
10
UniProt
VAR_006289
V
1220
I
MET_HUMAN
Disease (RCCP)
---
A
V
1220
I
11
UniProt
VAR_032493
M
1250
I
MET_HUMAN
Disease (HCC)
---
A
M
1250
I
12
UniProt
VAR_006294
M
1250
T
MET_HUMAN
Disease (RCCP)
---
A
M
1250
T
13
UniProt
VAR_064857
V
1294
I
MET_HUMAN
Unclassified
---
A
V
1294
I
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:1084-1110)
2: PROTEIN_KINASE_TYR (A:1200-1212)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
MET_HUMAN
1084-1110
2
A:1084-1110
2
PROTEIN_KINASE_TYR
PS00109
Tyrosine protein kinases specific active-site signature.
MET_HUMAN
1200-1212
2
A:1200-1212
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Exons
(0, 0)
Info
All Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3u6ha_ (A:)
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Organisms
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)
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)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
Hepatocyte growth factor receptor, c-MET
(34)
Human (Homo sapiens) [TaxId: 9606]
(34)
1a
d3u6ha_
A:
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CATH Domains
(0, 0)
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Pfam Domains
(0, 0)
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Asym.Unit (57 KB)
Header - Asym.Unit
Biol.Unit 1 (52 KB)
Header - Biol.Unit 1
Biol.Unit 2 (102 KB)
Header - Biol.Unit 2
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