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3U23
Asym. Unit
Info
Asym.Unit (34 KB)
Biol.Unit 1 (29 KB)
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(1)
Title
:
ATOMIC RESOLUTION CRYSTAL STRUCTURE OF THE 2ND SH3 DOMAIN FROM HUMAN CD2AP (CMS) IN COMPLEX WITH A PROLINE-RICH PEPTIDE FROM HUMAN RIN3
Authors
:
P. C. Simister, E. Rouka, M. Janning, J. R. C. Muniz, K. H. Kirsch, S. Knap Delft, P. Filippakopoulos, C. H. Arrowsmith, T. Krojer, A. M. Edwards J. Weigelt, C. Bountra, S. M. Feller, Structural Genomics Consorti
Date
:
30 Sep 11 (Deposition) - 28 Dec 11 (Release) - 09 Mar 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.11
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Structural Genomics, Structural Genomics Consortium, Sgc, Beta- Barrel, Adaptor Protein, Protein Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. Rouka, P. C. Simister, M. Janning, J. Kumbrink, T. Konstantinou, J. R. Muniz, D. Joshi, N. O'Reilly, R. Volkmer, B. Ritter, S. Knapp, F. Von Delft, K. H. Kirsch, S. M. Feller
Differential Recognition Preferences Of The Three Src Homology 3 (Sh3) Domains From The Adaptor Cd2-Associated Protein (Cd2Ap) And Direct Association With Ras And Rab Interactor 3 (Rin3).
J. Biol. Chem. V. 290 25275 2015
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
2a: AMINO GROUP (NH2a)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
1
Ligand/Ion
1,2-ETHANEDIOL
2
NH2
1
Mod. Amino Acid
AMINO GROUP
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:72 , HOH A:99 , ILE A:137 , VAL A:162
BINDING SITE FOR RESIDUE EDO A 1
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(2, 2)
Info
All Exons
Exon 1.4a (A:111-140)
Exon 1.5 (A:141-166)
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All Exon Boundaries
1: Boundary 1.3a/1.4a
2: Boundary 1.4a/1.5
3: Boundary 1.5/1.6
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000359314
1
ENSE00001516297
chr6:
47445525-47445984
460
CD2AP_HUMAN
1-2
2
0
-
-
1.2
ENST00000359314
2
ENSE00000755720
chr6:
47471016-47471176
161
CD2AP_HUMAN
2-55
54
0
-
-
1.3a
ENST00000359314
3a
ENSE00000619362
chr6:
47501338-47501491
154
CD2AP_HUMAN
56-107
52
0
-
-
1.4a
ENST00000359314
4a
ENSE00001139103
chr6:
47512342-47512442
101
CD2AP_HUMAN
107-140
34
1
A:111-140
30
1.5
ENST00000359314
5
ENSE00001139093
chr6:
47522382-47522502
121
CD2AP_HUMAN
141-181
41
1
A:141-166
26
1.6
ENST00000359314
6
ENSE00001139085
chr6:
47541800-47541987
188
CD2AP_HUMAN
181-243
63
0
-
-
1.7b
ENST00000359314
7b
ENSE00001139077
chr6:
47544260-47544338
79
CD2AP_HUMAN
244-270
27
0
-
-
1.8
ENST00000359314
8
ENSE00002190760
chr6:
47544745-47544839
95
CD2AP_HUMAN
270-301
32
0
-
-
1.9a
ENST00000359314
9a
ENSE00001139061
chr6:
47547121-47547225
105
CD2AP_HUMAN
302-336
35
0
-
-
1.10
ENST00000359314
10
ENSE00002145560
chr6:
47548600-47548636
37
CD2AP_HUMAN
337-349
13
0
-
-
1.11a
ENST00000359314
11a
ENSE00001139049
chr6:
47549739-47549801
63
CD2AP_HUMAN
349-370
22
0
-
-
1.12
ENST00000359314
12
ENSE00001139043
chr6:
47563597-47563762
166
CD2AP_HUMAN
370-425
56
0
-
-
1.13
ENST00000359314
13
ENSE00001139036
chr6:
47567037-47567179
143
CD2AP_HUMAN
425-473
49
0
-
-
1.14
ENST00000359314
14
ENSE00001139029
chr6:
47573901-47574013
113
CD2AP_HUMAN
473-510
38
0
-
-
1.15b
ENST00000359314
15b
ENSE00001139023
chr6:
47575663-47575764
102
CD2AP_HUMAN
511-544
34
0
-
-
1.16a
ENST00000359314
16a
ENSE00001139019
chr6:
47576859-47577040
182
CD2AP_HUMAN
545-605
61
0
-
-
1.17
ENST00000359314
17
ENSE00001176400
chr6:
47580209-47580272
64
CD2AP_HUMAN
605-626
22
0
-
-
1.18
ENST00000359314
18
ENSE00001454693
chr6:
47591922-47594999
3078
CD2AP_HUMAN
627-639
13
0
-
-
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Asym.Unit (34 KB)
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