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3U1A
Asym. Unit
Info
Asym.Unit (120 KB)
Biol.Unit 1 (58 KB)
Biol.Unit 2 (58 KB)
Biol.Unit 3 (115 KB)
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(1)
Title
:
N-TERMINAL 81-AA FRAGMENT OF SMOOTH MUSCLE TROPOMYOSIN ALPHA
Authors
:
N. Jampani, R. Dominguez
Date
:
29 Sep 11 (Deposition) - 23 Nov 11 (Release) - 04 Sep 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: A,B,C,D (1x)
Keywords
:
Muscle Contraction, Actin, Contractile Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. N. Rao, R. Rivera-Santiago, X. E. Li, W. Lehman, R. Dominguez
Structural Analysis Of Smooth Muscle Tropomyosin Alpha And Beta Isoforms.
J. Biol. Chem. V. 287 3165 2012
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(3, 11)
Info
All Exons
Exon 1.1d (A:1-38 | B:1-38 | C:1-38 | D:1-38)
Exon 1.3 (A:39-80 | B:39-80 | C:39-80 | D:39...)
Exon 1.6 (A:81-81 | B:81-81 | C:81-81 | -)
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All Exon Boundaries
1: Boundary -/1.1d
2: Boundary 1.1d/1.3
3: Boundary 1.3/1.6
4: Boundary 1.6/1.7
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1d
ENSGALT00000005572
1d
ENSGALE00000035748
chr10:
5126807-5126694
114
TPM1_CHICK
1-38
38
4
A:1-38
B:1-38
C:1-38
D:1-38
38
38
38
38
1.3
ENSGALT00000005572
3
ENSGALE00000035746
chr10:
5125697-5125572
126
TPM1_CHICK
39-80
42
4
A:39-80
B:39-80
C:39-80
D:39-79
42
42
42
41
1.6
ENSGALT00000005572
6
ENSGALE00000261249
chr10:
5119184-5119051
134
TPM1_CHICK
81-125
45
3
A:81-81
B:81-81
C:81-81
-
1
1
1
-
1.7
ENSGALT00000005572
7
ENSGALE00000035741
chr10:
5117763-5117646
118
TPM1_CHICK
125-164
40
0
-
-
1.8
ENSGALT00000005572
8
ENSGALE00000035743
chr10:
5117525-5117455
71
TPM1_CHICK
165-188
24
0
-
-
1.10
ENSGALT00000005572
10
ENSGALE00000035749
chr10:
5116647-5116572
76
TPM1_CHICK
188-213
26
0
-
-
1.11
ENSGALT00000005572
11
ENSGALE00000035745
chr10:
5116155-5116093
63
TPM1_CHICK
214-234
21
0
-
-
1.12
ENSGALT00000005572
12
ENSGALE00000261199
chr10:
5115818-5115749
70
TPM1_CHICK
235-258
24
0
-
-
1.13b
ENSGALT00000005572
13b
ENSGALE00000145267
chr10:
5114603-5114519
85
TPM1_CHICK
258-284
27
0
-
-
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3u1aa_ (A:)
1b: SCOP_d3u1ab_ (B:)
1c: SCOP_d3u1ac_ (C:)
1d: SCOP_d3u1ad_ (D:)
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Class
:
Coiled coil proteins
(689)
Fold
:
Parallel coiled-coil
(407)
Superfamily
:
Tropomyosin
(10)
Family
:
automated matches
(1)
Protein domain
:
automated matches
(1)
Chicken (Gallus gallus) [TaxId: 9031]
(1)
1a
d3u1aa_
A:
1b
d3u1ab_
B:
1c
d3u1ac_
C:
1d
d3u1ad_
D:
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CATH Domains
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Pfam Domains
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Asym.Unit (120 KB)
Header - Asym.Unit
Biol.Unit 1 (58 KB)
Header - Biol.Unit 1
Biol.Unit 2 (58 KB)
Header - Biol.Unit 2
Biol.Unit 3 (115 KB)
Header - Biol.Unit 3
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