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3U16
Asym. Unit
Info
Asym.Unit (158 KB)
Biol.Unit 1 (77 KB)
Biol.Unit 2 (77 KB)
Biol.Unit 3 (150 KB)
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(1)
Title
:
STRUCTURE OF BASE N-TERMINAL DOMAIN FROM ACINETOBACTER BAUMANNII BOUND TO 6-(P-BENZYLOXY)PHENYL-1-(PYRIDIN-4-YLMETHYL)-1H-PYRAZOLO[3,4-B]PYRIDINE-4-CARBOXYLIC ACID.
Authors
:
A. M. Gulick, E. J. Drake, C. C. Aldrich, J. Neres
Date
:
29 Sep 11 (Deposition) - 03 Oct 12 (Release) - 03 Oct 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (1x)
Keywords
:
Anl Superfamily, Adenylating Enzyme, 2, 3-Dihydroxybenzoate:Aryl Carrier Protein Ligase, Basf, Ligase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
J. Neres, E. Drake, A. M. Gulick, C. C. Aldrich
Structure-Activity Relationship Of Base
To Be Published
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Hetero Components
(4, 10)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
1f: CALCIUM ION (CAf)
2a: 6-[4-(BENZYLOXY)PHENYL]-1-(PYRIDIN... (H89a)
2b: 6-[4-(BENZYLOXY)PHENYL]-1-(PYRIDIN... (H89b)
3a: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDa)
4a: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CA
6
Ligand/Ion
CALCIUM ION
2
H89
2
Ligand/Ion
6-[4-(BENZYLOXY)PHENYL]-1-(PYRIDIN-4-YLMETHYL)-1H-PYRAZOLO[3,4-B]PYRIDINE-4-CARBOXYLIC ACID
3
MPD
1
Ligand/Ion
(4S)-2-METHYL-2,4-PENTANEDIOL
4
MRD
1
Ligand/Ion
(4R)-2-METHYLPENTANE-2,4-DIOL
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PRO A:238 , HIS A:241 , ASN A:242 , PHE A:243 , SER A:247 , PRO A:266 , GLY A:314 , PHE A:337 , GLY A:338 , MET A:339
BINDING SITE FOR RESIDUE H89 A 543
02
AC2
SOFTWARE
GLN A:53 , GLU A:58 , HOH A:784 , HOH A:785 , HOH A:794 , ASP B:171
BINDING SITE FOR RESIDUE CA A 544
03
AC3
SOFTWARE
GLN A:305 , LEU A:307 , ASN A:330 , HOH A:780 , HOH A:781 , ASP B:302
BINDING SITE FOR RESIDUE CA A 545
04
AC4
SOFTWARE
GLU A:327 , ASN A:330 , HOH A:619 , HOH A:620 , HOH A:782 , GLN B:279
BINDING SITE FOR RESIDUE CA A 546
05
AC5
SOFTWARE
SER A:418 , HOH A:575 , HOH A:576 , HOH A:577 , HOH A:647
BINDING SITE FOR RESIDUE CA A 547
06
AC6
SOFTWARE
CYS A:225 , GLY A:226 , THR A:231 , ASN A:281 , MET A:282 , LEU A:349
BINDING SITE FOR RESIDUE MPD A 548
07
AC7
SOFTWARE
PRO B:238 , HIS B:241 , ASN B:242 , PHE B:243 , SER B:247 , PRO B:266 , GLY B:314 , GLY B:338 , MET B:339 , ARG B:435
BINDING SITE FOR RESIDUE H89 B 543
08
AC8
SOFTWARE
SER B:418 , HOH B:562 , HOH B:563 , HOH B:591 , HOH B:654 , HOH B:795
BINDING SITE FOR RESIDUE CA B 544
09
AC9
SOFTWARE
GLN B:305 , LEU B:307 , ASN B:330 , HOH B:566 , HOH B:567 , HOH B:568 , HOH B:569
BINDING SITE FOR RESIDUE CA B 545
10
BC1
SOFTWARE
GLY B:226 , LEU B:227 , THR B:231 , ASN B:281 , MET B:282 , HOH B:770 , HOH B:781
BINDING SITE FOR RESIDUE MRD B 546
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3u16a_ (A:)
1b: SCOP_d3u16b_ (B:)
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Organisms
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Class
:
Multi-domain proteins (alpha and beta)
(2421)
Fold
:
Acetyl-CoA synthetase-like
(64)
Superfamily
:
Acetyl-CoA synthetase-like
(64)
Family
:
automated matches
(26)
Protein domain
:
automated matches
(26)
Acinetobacter baumannii [TaxId: 557601]
(5)
1a
d3u16a_
A:
1b
d3u16b_
B:
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CATH Domains
(0, 0)
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (158 KB)
Header - Asym.Unit
Biol.Unit 1 (77 KB)
Header - Biol.Unit 1
Biol.Unit 2 (77 KB)
Header - Biol.Unit 2
Biol.Unit 3 (150 KB)
Header - Biol.Unit 3
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