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3TZU
Asym. Unit
Info
Asym.Unit (161 KB)
Biol.Unit 1 (79 KB)
Biol.Unit 2 (79 KB)
Biol.Unit 3 (42 KB)
Biol.Unit 4 (41 KB)
Biol.Unit 5 (41 KB)
Biol.Unit 6 (41 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A GLYCINE CLEAVAGE SYSTEM H PROTEIN (GCVH) FROM MYCOBACTERIUM MARINUM
Authors
:
Seattle Structural Genomics Center For Infectious Disease (S
Date
:
27 Sep 11 (Deposition) - 05 Oct 11 (Release) - 22 Apr 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Biol. Unit 3: A (1x)
Biol. Unit 4: B (1x)
Biol. Unit 5: C (1x)
Biol. Unit 6: D (1x)
Keywords
:
Ssgcid, Structural Genomics, Seattle Structural Genomics Center For Infectious Disease, Transport Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Baugh, I. Phan, D. W. Begley, M. C. Clifton, B. Armour, D. M. Dranow, B. M. Taylor, M. M. Muruthi, J. Abendroth, J. W. Fairman, D. Fox, S. H. Dieterich, B. L. Staker, A. S. Gardberg, R. Choi, S. N. Hewitt, A. J. Napuli, J. Myers, L. K. Barrett, Y. Zhang, M. Ferrell, E. Mundt, K. Thompkins, N. Tran, S. Lyons-Abbott, A. Abramov, A. Sekar, D. Serbzhinskiy, D. Lorimer, G. W. Buchko, R. Stacy, L. J. Stewart, T. E. Edwards, W. C. Van Voorhis, P. J. Myler
Increasing The Structural Coverage Of Tuberculosis Drug Targets.
Tuberculosis (Edinb) V. 95 142 2015
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Hetero Components
(3, 10)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
3a: DI(HYDROXYETHYL)ETHER (PEGa)
3b: DI(HYDROXYETHYL)ETHER (PEGb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
2
Ligand/Ion
ACETATE ION
2
EDO
6
Ligand/Ion
1,2-ETHANEDIOL
3
PEG
2
Ligand/Ion
DI(HYDROXYETHYL)ETHER
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER B:60 , SER B:82 , HOH B:175 , SER D:60 , SER D:82 , HOH D:138 , HOH D:152
BINDING SITE FOR RESIDUE ACT B 134
02
AC2
SOFTWARE
SER A:60 , SER A:82 , HOH A:151 , SER C:60 , SER C:82 , HOH C:156
BINDING SITE FOR RESIDUE ACT A 134
03
AC3
SOFTWARE
ALA A:43 , LYS A:72 , THR A:73 , EDO A:137 , HOH A:162 , ASP C:15 , SER C:75
BINDING SITE FOR RESIDUE EDO A 135
04
AC4
SOFTWARE
ASP A:15 , GLU A:17 , VAL A:68 , SER A:75 , ASP A:76 , LEU A:77 , ILE A:78 , EDO A:137
BINDING SITE FOR RESIDUE EDO A 136
05
AC5
SOFTWARE
ASP B:15 , GLU B:17 , SER B:75 , ASP B:76 , HOH B:178 , HOH D:167
BINDING SITE FOR RESIDUE EDO B 135
06
AC6
SOFTWARE
SER A:75 , EDO A:135 , EDO A:136 , HOH A:177 , ALA C:43
BINDING SITE FOR RESIDUE EDO A 137
07
AC7
SOFTWARE
ALA B:43 , LYS B:72 , THR B:73 , HOH B:155 , SER D:75
BINDING SITE FOR RESIDUE EDO B 136
08
AC8
SOFTWARE
SER C:11 , ALA C:22 , GLY C:24
BINDING SITE FOR RESIDUE EDO C 134
09
AC9
SOFTWARE
LYS A:72 , HOH A:145 , LYS B:72 , VAL B:74 , HOH B:146 , ASP C:76 , ASP D:76
BINDING SITE FOR RESIDUE PEG C 135
10
BC1
SOFTWARE
GLU A:67 , ASP A:76 , ASP B:76 , HOH B:158 , LYS C:72 , LYS D:72 , VAL D:74 , HOH D:169
BINDING SITE FOR RESIDUE PEG A 138
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3tzua_ (A:)
1b: SCOP_d3tzub_ (B:)
1c: SCOP_d3tzuc_ (C:)
1d: SCOP_d3tzud_ (D:)
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Class
:
All beta proteins
(24004)
Fold
:
Barrel-sandwich hybrid
(185)
Superfamily
:
Single hybrid motif
(49)
Family
:
automated matches
(9)
Protein domain
:
automated matches
(9)
Mycobacterium marinum [TaxId: 216594]
(1)
1a
d3tzua_
A:
1b
d3tzub_
B:
1c
d3tzuc_
C:
1d
d3tzud_
D:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (161 KB)
Header - Asym.Unit
Biol.Unit 1 (79 KB)
Header - Biol.Unit 1
Biol.Unit 2 (79 KB)
Header - Biol.Unit 2
Biol.Unit 3 (42 KB)
Header - Biol.Unit 3
Biol.Unit 4 (41 KB)
Header - Biol.Unit 4
Biol.Unit 5 (41 KB)
Header - Biol.Unit 5
Biol.Unit 6 (41 KB)
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