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3TZH
Biol. Unit 3
Info
Asym.Unit (473 KB)
Biol.Unit 1 (310 KB)
Biol.Unit 2 (313 KB)
Biol.Unit 3 (314 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF 3-KETOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (FABG)(F187A) FROM VIBRIO CHOLERAE
Authors
:
J. Hou, M. Chruszcz, H. Zheng, D. R. Cooper, T. Osinski, I. Shumilin, W. F. Anderson, W. Minor, Center For Structural Genomics Of Infe Diseases (Csgid)
Date
:
27 Sep 11 (Deposition) - 19 Oct 11 (Release) - 19 Oct 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,F (2x)
Biol. Unit 2: B,E (2x)
Biol. Unit 3: C,D (2x)
Keywords
:
Vibrio Cholerae, 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase, Fabg, Oxidoreductase, Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid
(Keyword Search:
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Reference
:
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Hetero Components
(3, 42)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
1g: GLYCEROL (GOLg)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
2d: SULFATE ION (SO4d)
2e: SULFATE ION (SO4e)
2f: SULFATE ION (SO4f)
2g: SULFATE ION (SO4g)
2h: SULFATE ION (SO4h)
2i: SULFATE ION (SO4i)
2j: SULFATE ION (SO4j)
2k: SULFATE ION (SO4k)
2l: SULFATE ION (SO4l)
2m: SULFATE ION (SO4m)
2n: SULFATE ION (SO4n)
2o: SULFATE ION (SO4o)
2p: SULFATE ION (SO4p)
2q: SULFATE ION (SO4q)
2r: SULFATE ION (SO4r)
2s: SULFATE ION (SO4s)
3a: UNKNOWN ATOM OR ION (UNXa)
3aa: UNKNOWN ATOM OR ION (UNXaa)
3ab: UNKNOWN ATOM OR ION (UNXab)
3ac: UNKNOWN ATOM OR ION (UNXac)
3ad: UNKNOWN ATOM OR ION (UNXad)
3ae: UNKNOWN ATOM OR ION (UNXae)
3af: UNKNOWN ATOM OR ION (UNXaf)
3ag: UNKNOWN ATOM OR ION (UNXag)
3ah: UNKNOWN ATOM OR ION (UNXah)
3ai: UNKNOWN ATOM OR ION (UNXai)
3aj: UNKNOWN ATOM OR ION (UNXaj)
3ak: UNKNOWN ATOM OR ION (UNXak)
3al: UNKNOWN ATOM OR ION (UNXal)
3am: UNKNOWN ATOM OR ION (UNXam)
3an: UNKNOWN ATOM OR ION (UNXan)
3ao: UNKNOWN ATOM OR ION (UNXao)
3ap: UNKNOWN ATOM OR ION (UNXap)
3aq: UNKNOWN ATOM OR ION (UNXaq)
3ar: UNKNOWN ATOM OR ION (UNXar)
3as: UNKNOWN ATOM OR ION (UNXas)
3at: UNKNOWN ATOM OR ION (UNXat)
3au: UNKNOWN ATOM OR ION (UNXau)
3b: UNKNOWN ATOM OR ION (UNXb)
3c: UNKNOWN ATOM OR ION (UNXc)
3d: UNKNOWN ATOM OR ION (UNXd)
3e: UNKNOWN ATOM OR ION (UNXe)
3f: UNKNOWN ATOM OR ION (UNXf)
3g: UNKNOWN ATOM OR ION (UNXg)
3h: UNKNOWN ATOM OR ION (UNXh)
3i: UNKNOWN ATOM OR ION (UNXi)
3j: UNKNOWN ATOM OR ION (UNXj)
3k: UNKNOWN ATOM OR ION (UNXk)
3l: UNKNOWN ATOM OR ION (UNXl)
3m: UNKNOWN ATOM OR ION (UNXm)
3n: UNKNOWN ATOM OR ION (UNXn)
3o: UNKNOWN ATOM OR ION (UNXo)
3p: UNKNOWN ATOM OR ION (UNXp)
3q: UNKNOWN ATOM OR ION (UNXq)
3r: UNKNOWN ATOM OR ION (UNXr)
3s: UNKNOWN ATOM OR ION (UNXs)
3t: UNKNOWN ATOM OR ION (UNXt)
3u: UNKNOWN ATOM OR ION (UNXu)
3v: UNKNOWN ATOM OR ION (UNXv)
3w: UNKNOWN ATOM OR ION (UNXw)
3x: UNKNOWN ATOM OR ION (UNXx)
3y: UNKNOWN ATOM OR ION (UNXy)
3z: UNKNOWN ATOM OR ION (UNXz)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOL
2
Ligand/Ion
GLYCEROL
2
SO4
16
Ligand/Ion
SULFATE ION
3
UNX
24
Ligand/Ion
UNKNOWN ATOM OR ION
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Sites
(9, 9)
Info
All Sites
1: AC9 (SOFTWARE)
2: BC1 (SOFTWARE)
3: BC2 (SOFTWARE)
4: BC3 (SOFTWARE)
5: BC4 (SOFTWARE)
6: BC5 (SOFTWARE)
7: BC6 (SOFTWARE)
8: BC7 (SOFTWARE)
9: BC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC9
SOFTWARE
MET C:1 , SER C:2 , ARG C:32 , MET D:1 , SER D:2 , ARG D:32
BINDING SITE FOR RESIDUE SO4 C 249
2
BC1
SOFTWARE
LYS C:103 , GLU C:104 , LYS C:123 , HOH C:266
BINDING SITE FOR RESIDUE SO4 C 250
3
BC2
SOFTWARE
ARG C:19 , GLY C:20 , LYS C:23 , HOH C:693
BINDING SITE FOR RESIDUE SO4 C 251
4
BC3
SOFTWARE
GLY C:83 , LYS C:132 , HOH C:263 , HOH C:342
BINDING SITE FOR RESIDUE SO4 C 252
5
BC4
SOFTWARE
ILE C:93 , ARG C:95
BINDING SITE FOR RESIDUE SO4 C 253
6
BC5
SOFTWARE
GLY C:16 , ALA C:17 , SER C:18 , ARG C:19 , ALA C:40 , THR C:41 , HOH C:284
BINDING SITE FOR RESIDUE GOL C 254
7
BC6
SOFTWARE
LYS D:103 , GLU D:104 , HOH D:304
BINDING SITE FOR RESIDUE SO4 D 249
8
BC7
SOFTWARE
ARG D:19 , GLY D:20 , LYS D:23 , HOH D:274
BINDING SITE FOR RESIDUE SO4 D 250
9
BC8
SOFTWARE
GLY D:82 , GLY D:83 , LYS D:132 , HOH D:277
BINDING SITE FOR RESIDUE SO4 D 251
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
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PROSITE Patterns/Profiles
(, 0)
Info
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 6)
Info
All SCOP Domains
1a: SCOP_d3tzhe_ (E:)
2a: SCOP_d3tzha_ (A:)
2b: SCOP_d3tzhb_ (B:)
2c: SCOP_d3tzhc_ (C:)
2d: SCOP_d3tzhd_ (D:)
2e: SCOP_d3tzhf_ (F:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
NAD(P)-binding Rossmann-fold domains
(1604)
Superfamily
:
NAD(P)-binding Rossmann-fold domains
(1604)
Family
:
Tyrosine-dependent oxidoreductases
(503)
Protein domain
:
automated matches
(114)
Vibrio cholerae [TaxId: 243277]
(7)
1a
d3tzhe_
E:
Vibrio cholerae [TaxId: 593588]
(3)
2a
d3tzha_
A:
2b
d3tzhb_
B:
2c
d3tzhc_
C:
2d
d3tzhd_
D:
2e
d3tzhf_
F:
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Atom Selection
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Sidechain
Hetero
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All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain C
Chain D
Asymmetric Unit 1
Asymmetric Unit 2
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Miscellaneous
Script
Example Commands
Example Command
Action
select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
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Asym.Unit (473 KB)
Header - Asym.Unit
Biol.Unit 1 (310 KB)
Header - Biol.Unit 1
Biol.Unit 2 (313 KB)
Header - Biol.Unit 2
Biol.Unit 3 (314 KB)
Header - Biol.Unit 3
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