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3TUG
Asym. Unit
Info
Asym.Unit (120 KB)
Biol.Unit 1 (115 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE HECT DOMAIN OF ITCH E3 UBIQUITIN LIGASE
Authors
:
A. Dong, E. Dobrovetsky, S. Xue, C. Butler, A. Wernimont, J. R. Walker, W S. Dhe-Paganon, C. H. Arrowsmith, A. M. Edwards, C. Bountra, Y. Tong, S Genomics Consortium (Sgc)
Date
:
16 Sep 11 (Deposition) - 12 Oct 11 (Release) - 12 Oct 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.27
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Structural Genomics, Structural Genomics Consortium, Sgc, Catalytic Domain, E3 Ligase, Ligase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. Dobrovetsky, A. Dong, S. Xue, C. Butler, A. Wernimont, J. R. Walker, W. Tempel, S. Dhe-Paganon, C. H. Arrowsmith, A. M. Edwards, C. Bountra Y. Tong
Crystal Structure Of The Hect Domain Of Itch E3 Ubiquitin Ligase
To Be Published
[
close entry info
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Hetero Components
(2, 10)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
2a: UNKNOWN ATOM OR ION (UNXa)
2b: UNKNOWN ATOM OR ION (UNXb)
2c: UNKNOWN ATOM OR ION (UNXc)
2d: UNKNOWN ATOM OR ION (UNXd)
2e: UNKNOWN ATOM OR ION (UNXe)
2f: UNKNOWN ATOM OR ION (UNXf)
2g: UNKNOWN ATOM OR ION (UNXg)
2h: UNKNOWN ATOM OR ION (UNXh)
2i: UNKNOWN ATOM OR ION (UNXi)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
1
Ligand/Ion
CHLORIDE ION
2
UNX
9
Ligand/Ion
UNKNOWN ATOM OR ION
[
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]
Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA A:775
BINDING SITE FOR RESIDUE CL A 100
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: HECT (A:569-897)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HECT
PS50237
HECT domain profile.
ITCH_HUMAN
569-903
1
A:569-897
[
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Exons
(11, 11)
Info
All Exons
Exon 1.16 (A:525-540)
Exon 1.17a (A:541-564)
Exon 1.18a (A:565-594)
Exon 1.19a (A:594-647 (gaps))
Exon 1.20 (A:648-692)
Exon 1.21c (A:692-739 (gaps))
Exon 1.22 (A:739-779)
Exon 1.23 (A:780-814)
Exon 1.24 (A:815-847)
Exon 1.25 (A:847-871)
Exon 1.26a (A:871-897)
View:
Select:
Label:
All Exon Boundaries
01: Boundary 1.15/1.16
02: Boundary 1.16/1.17a
03: Boundary 1.17a/1.18a
04: Boundary 1.18a/1.19a
05: Boundary 1.19a/1.20
06: Boundary 1.20/1.21c
07: Boundary 1.21c/1.22
08: Boundary 1.22/1.23
09: Boundary 1.23/1.24
10: Boundary 1.24/1.25
11: Boundary 1.25/1.26a
12: Boundary 1.26a/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1d
ENST00000262650
1d
ENSE00001927440
chr20:
32951118-32951155
38
ITCH_HUMAN
-
0
0
-
-
1.2a
ENST00000262650
2a
ENSE00001365031
chr20:
32957200-32957276
77
ITCH_HUMAN
-
0
0
-
-
1.3b
ENST00000262650
3b
ENSE00000898488
chr20:
32981597-32981687
91
ITCH_HUMAN
1-24
24
0
-
-
1.4
ENST00000262650
4
ENSE00001151953
chr20:
32996457-32996598
142
ITCH_HUMAN
24-71
48
0
-
-
1.5
ENST00000262650
5
ENSE00000661393
chr20:
33000321-33000445
125
ITCH_HUMAN
71-113
43
0
-
-
1.6
ENST00000262650
6
ENSE00000860103
chr20:
33001548-33001685
138
ITCH_HUMAN
113-159
47
0
-
-
1.7
ENST00000262650
7
ENSE00001775071
chr20:
33004923-33005045
123
ITCH_HUMAN
159-200
42
0
-
-
1.8
ENST00000262650
8
ENSE00000898489
chr20:
33012286-33012331
46
ITCH_HUMAN
200-215
16
0
-
-
1.9
ENST00000262650
9
ENSE00000898490
chr20:
33026279-33026436
158
ITCH_HUMAN
215-268
54
0
-
-
1.10
ENST00000262650
10
ENSE00000898491
chr20:
33027960-33028149
190
ITCH_HUMAN
268-331
64
0
-
-
1.11
ENST00000262650
11
ENSE00000661399
chr20:
33030013-33030108
96
ITCH_HUMAN
331-363
33
0
-
-
1.12a
ENST00000262650
12a
ENSE00000860104
chr20:
33033092-33033266
175
ITCH_HUMAN
363-421
59
0
-
-
1.13
ENST00000262650
13
ENSE00000860105
chr20:
33037216-33037285
70
ITCH_HUMAN
422-445
24
0
-
-
1.14
ENST00000262650
14
ENSE00000561078
chr20:
33045195-33045279
85
ITCH_HUMAN
445-473
29
0
-
-
1.15
ENST00000262650
15
ENSE00000661407
chr20:
33049898-33050026
129
ITCH_HUMAN
473-516
44
0
-
-
1.16
ENST00000262650
16
ENSE00000898492
chr20:
33057853-33057925
73
ITCH_HUMAN
516-540
25
1
A:525-540
16
1.17a
ENST00000262650
17a
ENSE00000860107
chr20:
33059249-33059320
72
ITCH_HUMAN
541-564
24
1
A:541-564
24
1.18a
ENST00000262650
18a
ENSE00000561080
chr20:
33065577-33065665
89
ITCH_HUMAN
565-594
30
1
A:565-594
30
1.19a
ENST00000262650
19a
ENSE00000561081
chr20:
33067435-33067594
160
ITCH_HUMAN
594-647
54
1
A:594-647 (gaps)
54
1.20
ENST00000262650
20
ENSE00000661422
chr20:
33068404-33068537
134
ITCH_HUMAN
648-692
45
1
A:648-692
45
1.21c
ENST00000262650
21c
ENSE00000561083
chr20:
33068871-33069011
141
ITCH_HUMAN
692-739
48
1
A:692-739 (gaps)
48
1.22
ENST00000262650
22
ENSE00000661428
chr20:
33077071-33077191
121
ITCH_HUMAN
739-779
41
1
A:739-779
41
1.23
ENST00000262650
23
ENSE00000561085
chr20:
33077627-33077731
105
ITCH_HUMAN
780-814
35
1
A:780-814
35
1.24
ENST00000262650
24
ENSE00000661432
chr20:
33080306-33080402
97
ITCH_HUMAN
815-847
33
1
A:815-847
33
1.25
ENST00000262650
25
ENSE00001700827
chr20:
33092136-33092208
73
ITCH_HUMAN
847-871
25
1
A:847-871
25
1.26a
ENST00000262650
26a
ENSE00001849071
chr20:
33095500-33096481
982
ITCH_HUMAN
871-903
33
1
A:871-897
27
[
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3tuga_ (A:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Hect, E3 ligase catalytic domain
(12)
Superfamily
:
Hect, E3 ligase catalytic domain
(12)
Family
:
Hect, E3 ligase catalytic domain
(4)
Protein domain
:
automated matches
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d3tuga_
A:
[
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CATH Domains
(0, 0)
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all CATH domains
View:
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Sorry, no Info available
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Pfam Domains
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Asymmetric Unit 1
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