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3TDU
Asym. Unit
Info
Asym.Unit (224 KB)
Biol.Unit 1 (109 KB)
Biol.Unit 2 (112 KB)
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(1)
Title
:
N-TERMINAL ACETYLATION ACTS AS AN AVIDITY ENHANCER WITHIN AN INTERCONNECTED MULTIPROTEIN COMPLEX: STRUCTURE OF A HUMAN CUL1WHB-DCN1P-ACETYLATED UBC12N COMPLEX
Authors
:
D. C. Scott, J. K. Monda, E. J. Bennett, J. W. Harper, B. A. Schulman
Date
:
11 Aug 11 (Deposition) - 12 Oct 11 (Release) - 23 Nov 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,C,E (1x)
Biol. Unit 2: B,D,F (1x)
Keywords
:
E2:E3, Ligase-Protein Binding Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
D. C. Scott, J. K. Monda, E. J. Bennett, J. W. Harper, B. A. Schulman
N-Terminal Acetylation Acts As An Avidity Enhancer Within A Interconnected Multiprotein Complex.
Science V. 334 674 2011
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: ACETYL GROUP (ACEa)
1b: ACETYL GROUP (ACEb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACE
2
Mod. Amino Acid
ACETYL GROUP
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: DCUN1 (A:62-248,B:62-248)
2: CULLIN_1 (C:749-776,D:749-776)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
DCUN1
PS51229
DCUN1 domain profile.
DCNL1_HUMAN
60-248
2
A:62-248
B:62-248
2
CULLIN_1
PS01256
Cullin family signature.
CUL1_HUMAN
749-776
2
C:749-776
D:749-776
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Exons
(4, 8)
Info
All Exons
Exon 1.1 (E:2-16 | F:2-16)
Exon 2.21 (C:702-712 | D:701-712)
Exon 2.22 (C:713-750 | D:713-750)
Exon 2.23c (C:751-776 | D:751-776)
View:
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 2.20/2.21
4: Boundary 2.21/2.22
5: Boundary 2.22/2.23c
6: Boundary 2.23c/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000253023
1
ENSE00000892667
chr19:
59070343-59069640
704
UBC12_HUMAN
1-37
37
2
E:2-16
F:2-16
15
15
1.2
ENST00000253023
2
ENSE00000655803
chr19:
59068524-59068430
95
UBC12_HUMAN
37-68
32
0
-
-
1.3
ENST00000253023
3
ENSE00000655805
chr19:
59068297-59068259
39
UBC12_HUMAN
69-81
13
0
-
-
1.4
ENST00000253023
4
ENSE00000655806
chr19:
59068157-59068054
104
UBC12_HUMAN
82-116
35
0
-
-
1.5
ENST00000253023
5
ENSE00000655807
chr19:
59067746-59067683
64
UBC12_HUMAN
116-137
22
0
-
-
1.6
ENST00000253023
6
ENSE00000892668
chr19:
59067596-59067080
517
UBC12_HUMAN
138-183
46
0
-
-
2.2a
ENST00000325222
2a
ENSE00001513479
chr7:
148395933-148396121
189
CUL1_HUMAN
-
0
0
-
-
2.3
ENST00000325222
3
ENSE00000909624
chr7:
148427054-148427354
301
CUL1_HUMAN
1-47
47
0
-
-
2.4
ENST00000325222
4
ENSE00000872301
chr7:
148451068-148451242
175
CUL1_HUMAN
47-105
59
0
-
-
2.5a
ENST00000325222
5a
ENSE00000729482
chr7:
148454075-148454242
168
CUL1_HUMAN
106-161
56
0
-
-
2.6
ENST00000325222
6
ENSE00000909625
chr7:
148456396-148456446
51
CUL1_HUMAN
162-178
17
0
-
-
2.7
ENST00000325222
7
ENSE00000466125
chr7:
148456640-148456730
91
CUL1_HUMAN
179-209
31
0
-
-
2.8
ENST00000325222
8
ENSE00000729503
chr7:
148457425-148457588
164
CUL1_HUMAN
209-263
55
0
-
-
2.9
ENST00000325222
9
ENSE00000909626
chr7:
148463653-148463815
163
CUL1_HUMAN
264-318
55
0
-
-
2.10
ENST00000325222
10
ENSE00000909627
chr7:
148464711-148464841
131
CUL1_HUMAN
318-361
44
0
-
-
2.11
ENST00000325222
11
ENSE00000909628
chr7:
148480875-148480982
108
CUL1_HUMAN
362-397
36
0
-
-
2.12
ENST00000325222
12
ENSE00000909629
chr7:
148481063-148481169
107
CUL1_HUMAN
398-433
36
0
-
-
2.13
ENST00000325222
13
ENSE00000909630
chr7:
148483643-148483691
49
CUL1_HUMAN
433-449
17
0
-
-
2.14
ENST00000325222
14
ENSE00000909631
chr7:
148484081-148484212
132
CUL1_HUMAN
450-493
44
0
-
-
2.15
ENST00000325222
15
ENSE00000909632
chr7:
148485649-148485766
118
CUL1_HUMAN
494-533
40
0
-
-
2.16
ENST00000325222
16
ENSE00000909633
chr7:
148486842-148486918
77
CUL1_HUMAN
533-558
26
0
-
-
2.17
ENST00000325222
17
ENSE00000909634
chr7:
148487402-148487533
132
CUL1_HUMAN
559-602
44
0
-
-
2.18
ENST00000325222
18
ENSE00000909635
chr7:
148489818-148489910
93
CUL1_HUMAN
603-633
31
0
-
-
2.19
ENST00000325222
19
ENSE00000909636
chr7:
148494904-148494951
48
CUL1_HUMAN
634-649
16
0
-
-
2.20
ENST00000325222
20
ENSE00000909637
chr7:
148495029-148495111
83
CUL1_HUMAN
650-677
28
0
-
-
2.21
ENST00000325222
21
ENSE00000909638
chr7:
148495664-148495769
106
CUL1_HUMAN
677-712
36
2
C:702-712
D:701-712
11
12
2.22
ENST00000325222
22
ENSE00000909639
chr7:
148496367-148496480
114
CUL1_HUMAN
713-750
38
2
C:713-750
D:713-750
38
38
2.23c
ENST00000325222
23c
ENSE00001388898
chr7:
148497594-148498201
608
CUL1_HUMAN
751-776
26
2
C:751-776
D:751-776
26
26
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SCOP Domains
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Pfam Domains
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Asym.Unit (224 KB)
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