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3TDE
Asym. Unit
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Asym.Unit (484 KB)
Biol.Unit 1 (477 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF S-ADENOSYLMETHIONINE SYNTHETASE RV1392 FROM MYCOBACTERIUM TUBERCULOSIS
Authors
:
Seattle Structural Genomics Center For Infectious Disease (S
Date
:
10 Aug 11 (Deposition) - 17 Aug 11 (Release) - 22 Apr 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.85
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Ssgcid, Seattle Structural Genomics Center For Infectious Disease, Tuberculosis, Adomet, Sam, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Baugh, I. Phan, D. W. Begley, M. C. Clifton, B. Armour, D. M. Dranow, B. M. Taylor, M. M. Muruthi, J. Abendroth, J. W. Fairman, D. Fox, S. H. Dieterich, B. L. Staker, A. S. Gardberg, R. Choi, S. N. Hewitt, A. J. Napuli, J. Myers, L. K. Barrett, Y. Zhang, M. Ferrell, E. Mundt, K. Thompkins, N. Tran, S. Lyons-Abbott, A. Abramov, A. Sekar, D. Serbzhinskiy, D. Lorimer, G. W. Buchko, R. Stacy, L. J. Stewart, T. E. Edwards, W. C. Van Voorhis, P. J. Myler
Increasing The Structural Coverage Of Tuberculosis Drug Targets.
Tuberculosis (Edinb) V. 95 142 2015
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: SODIUM ION (NAa)
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No.
Name
Count
Type
Full Name
1
NA
1
Ligand/Ion
SODIUM ION
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Sites
(1, 1)
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All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG D:195 , THR D:240 , HOH D:414 , HOH D:451 , HOH D:524 , HOH D:1269
BINDING SITE FOR RESIDUE NA D 404
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(2, 8)
Info
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1: ADOMET_SYNTHASE_1 (A:133-141,B:133-141,C:132-141,D:13...)
2: ADOMET_SYNTHASE_2 (A:279-287,B:280-287,C:279-287,D:27...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ADOMET_SYNTHASE_1
PS00376
S-adenosylmethionine synthase signature 1.
METK_MYCTO
131-141
4
A:133-141
B:133-141
C:132-141
D:133-141
METK_MYCTU
131-141
4
A:133-141
B:133-141
C:132-141
D:133-141
2
ADOMET_SYNTHASE_2
PS00377
S-adenosylmethionine synthase signature 2.
METK_MYCTO
279-287
4
A:279-287
B:280-287
C:279-287
D:279-287
METK_MYCTU
279-287
4
A:279-287
B:280-287
C:279-287
D:279-287
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 12)
Info
All SCOP Domains
1a: SCOP_d3tdea1 (A:6-103)
1b: SCOP_d3tdea2 (A:133-252)
1c: SCOP_d3tded2 (D:133-252)
1d: SCOP_d3tded3 (D:253-403)
1e: SCOP_d3tdea3 (A:253-403)
1f: SCOP_d3tdeb1 (B:5-104)
1g: SCOP_d3tdeb2 (B:133-252)
1h: SCOP_d3tdeb3 (B:253-403)
1i: SCOP_d3tdec1 (C:5-107)
1j: SCOP_d3tdec2 (C:132-252)
1k: SCOP_d3tdec3 (C:253-403)
1l: SCOP_d3tded1 (D:5-107)
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
S-adenosylmethionine synthetase
(23)
Superfamily
:
S-adenosylmethionine synthetase
(23)
Family
:
automated matches
(8)
Protein domain
:
automated matches
(8)
Mycobacterium tuberculosis [TaxId: 1773]
(1)
1a
d3tdea1
A:6-103
1b
d3tdea2
A:133-252
1c
d3tded2
D:133-252
1d
d3tded3
D:253-403
1e
d3tdea3
A:253-403
1f
d3tdeb1
B:5-104
1g
d3tdeb2
B:133-252
1h
d3tdeb3
B:253-403
1i
d3tdec1
C:5-107
1j
d3tdec2
C:132-252
1k
d3tdec3
C:253-403
1l
d3tded1
D:5-107
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CATH Domains
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Asymmetric Unit 1
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Asym.Unit (484 KB)
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