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3TAT
Biol. Unit 3
Info
Asym.Unit (367 KB)
Biol.Unit 1 (123 KB)
Biol.Unit 2 (124 KB)
Biol.Unit 3 (125 KB)
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(1)
Title
:
TYROSINE AMINOTRANSFERASE FROM E. COLI
Authors
:
T. P. Ko, W. Z. Yang, S. P. Wu, H. Tsai, H. S. Yuan
Date
:
12 Aug 98 (Deposition) - 12 Aug 99 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.50
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Keywords
:
Aminotransferase, Aromatic Substrates, Plp Enzyme
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
T. P. Ko, S. P. Wu, W. Z. Yang, H. Tsai, H. S. Yuan
Crystallization And Preliminary Crystallographic Analysis O The Escherichia Coli Tyrosine Aminotransferase.
Acta Crystallogr. , Sect. D V. 55 1474 1999
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: PYRIDOXAL-5'-PHOSPHATE (PLPa)
1b: PYRIDOXAL-5'-PHOSPHATE (PLPb)
1c: PYRIDOXAL-5'-PHOSPHATE (PLPc)
1d: PYRIDOXAL-5'-PHOSPHATE (PLPd)
1e: PYRIDOXAL-5'-PHOSPHATE (PLPe)
1f: PYRIDOXAL-5'-PHOSPHATE (PLPf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
PLP
2
Ligand/Ion
PYRIDOXAL-5'-PHOSPHATE
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Sites
(4, 4)
Info
All Sites
1: AC5 (SOFTWARE)
2: AC6 (SOFTWARE)
3: PBE (UNKNOWN)
4: PBF (UNKNOWN)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC5
SOFTWARE
GLY E:107 , GLY E:108 , SER E:109 , HIS E:189 , ASN E:194 , ASP E:222 , ALA E:224 , TYR E:225 , SER E:257 , LYS E:258 , ARG E:266 , TYR F:70
BINDING SITE FOR RESIDUE PLP E 500
2
AC6
SOFTWARE
TYR E:70 , GLY F:107 , GLY F:108 , SER F:109 , HIS F:189 , ASN F:194 , ASP F:222 , ALA F:224 , TYR F:225 , SER F:257 , LYS F:258 , ARG F:266
BINDING SITE FOR RESIDUE PLP F 500
3
PBE
UNKNOWN
LYS E:258
COVALENTLY LINKED WITH PLP 500
4
PBF
UNKNOWN
LYS F:258
COVALENTLY LINKED WITH PLP 500
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: AA_TRANSFER_CLASS_1 (E:255-268,F:255-268)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
AA_TRANSFER_CLASS_1
PS00105
Aminotransferases class-I pyridoxal-phosphate attachment site.
TYRB_ECOLI
244-257
2
-
-
-
-
E:255-268
F:255-268
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d3tata_ (A:)
1b: SCOP_d3tatb_ (B:)
1c: SCOP_d3tatc_ (C:)
1d: SCOP_d3tatd_ (D:)
1e: SCOP_d3tate_ (E:)
1f: SCOP_d3tatf_ (F:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
PLP-dependent transferase-like
(627)
Superfamily
:
PLP-dependent transferases
(625)
Family
:
AAT-like
(184)
Protein domain
:
Aromatic aminoacid aminotransferase, AroAT
(17)
Escherichia coli [TaxId: 562]
(1)
1a
d3tata_
A:
1b
d3tatb_
B:
1c
d3tatc_
C:
1d
d3tatd_
D:
1e
d3tate_
E:
1f
d3tatf_
F:
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CATH Domains
(2, 12)
Info
all CATH domains
1a: CATH_3tatA02 (A:64-312)
1b: CATH_3tatB02 (B:64-312)
1c: CATH_3tatC02 (C:64-312)
1d: CATH_3tatD02 (D:64-312)
1e: CATH_3tatE02 (E:64-312)
1f: CATH_3tatF02 (F:64-312)
2a: CATH_3tatA01 (A:5-63,A:313-408)
2b: CATH_3tatB01 (B:5-63,B:313-408)
2c: CATH_3tatC01 (C:5-63,C:313-408)
2d: CATH_3tatD01 (D:5-63,D:313-408)
2e: CATH_3tatE01 (E:5-63,E:313-408)
2f: CATH_3tatF01 (F:5-63,F:313-408)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Aspartate Aminotransferase; domain 2
(384)
Homologous Superfamily
:
Type I PLP-dependent aspartate aminotransferase-like (Major domain)
(384)
Escherichia coli. Organism_taxid: 562. Strain: n4830-1.
(1)
1a
3tatA02
A:64-312
1b
3tatB02
B:64-312
1c
3tatC02
C:64-312
1d
3tatD02
D:64-312
1e
3tatE02
E:64-312
1f
3tatF02
F:64-312
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Aspartate Aminotransferase, domain 1
(355)
Homologous Superfamily
:
Aspartate Aminotransferase, domain 1
(354)
Escherichia coli. Organism_taxid: 562. Strain: n4830-1.
(1)
2a
3tatA01
A:5-63,A:313-408
2b
3tatB01
B:5-63,B:313-408
2c
3tatC01
C:5-63,C:313-408
2d
3tatD01
D:5-63,D:313-408
2e
3tatE01
E:5-63,E:313-408
2f
3tatF01
F:5-63,F:313-408
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Pfam Domains
(1, 6)
Info
all PFAM domains
1a: PFAM_Aminotran_1_2_3tatF01 (F:30-404)
1b: PFAM_Aminotran_1_2_3tatF02 (F:30-404)
1c: PFAM_Aminotran_1_2_3tatF03 (F:30-404)
1d: PFAM_Aminotran_1_2_3tatF04 (F:30-404)
1e: PFAM_Aminotran_1_2_3tatF05 (F:30-404)
1f: PFAM_Aminotran_1_2_3tatF06 (F:30-404)
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Clan
:
PLP_aminotran
(240)
Family
:
Aminotran_1_2
(77)
Escherichia coli (strain K12)
(18)
1a
Aminotran_1_2-3tatF01
F:30-404
1b
Aminotran_1_2-3tatF02
F:30-404
1c
Aminotran_1_2-3tatF03
F:30-404
1d
Aminotran_1_2-3tatF04
F:30-404
1e
Aminotran_1_2-3tatF05
F:30-404
1f
Aminotran_1_2-3tatF06
F:30-404
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Asym.Unit (367 KB)
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