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3T8O
Asym. Unit
Info
Asym.Unit (178 KB)
Biol.Unit 1 (172 KB)
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(1)
Title
:
RHODOPSIN KINASE (GRK1) L166K MUTANT AT 2.5A RESOLUTION
Authors
:
J. J. G. Tesmer, P. Singh, M. R. Nance
Date
:
01 Aug 11 (Deposition) - 06 Jun 12 (Release) - 23 Jan 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Kinase Domain, Rgs Homology (Rh) Domain, G-Protein Receptor Kinase (Gpcr), Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. J. Tesmer, M. R. Nance, P. Singh, H. Lee
Structure Of A Monomeric Variant Of Rhodopsin Kinase At 2. 5 A Resolution.
Acta Crystallogr. , Sect. F V. 68 622 2012
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Hetero Components
(4, 4)
Info
All Hetero Components
1a: ADENOSINE-5'-TRIPHOSPHATE (ATPa)
2a: CHLORIDE ION (CLa)
3a: GLYCEROL (GOLa)
4a: MAGNESIUM ION (MGa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ATP
1
Ligand/Ion
ADENOSINE-5'-TRIPHOSPHATE
2
CL
1
Ligand/Ion
CHLORIDE ION
3
GOL
1
Ligand/Ion
GLYCEROL
4
MG
1
Ligand/Ion
MAGNESIUM ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LEU A:193 , GLY A:196 , GLY A:197 , VAL A:201 , LYS A:216 , THR A:265 , MET A:267 , LEU A:321 , ASP A:332 , LYS A:497 , GLU A:501 , HOH A:545 , HOH A:546 , HOH A:547 , MG A:564
BINDING SITE FOR RESIDUE ATP A 562
2
AC2
SOFTWARE
ASP A:332 , ATP A:562 , HOH A:581 , HOH A:583 , HOH A:584
BINDING SITE FOR RESIDUE MG A 564
3
AC3
SOFTWARE
GLN A:287 , ARG A:290
BINDING SITE FOR RESIDUE CL A 565
4
AC4
SOFTWARE
ASP A:367 , SER A:369 , GLU A:433 , LYS A:434 , GLY A:437 , PHE A:438 , HOH A:573
BINDING SITE FOR RESIDUE GOL A 544
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(4, 4)
Info
All PROSITE Patterns/Profiles
1: RGS (A:63-172)
2: PROTEIN_KINASE_ATP (A:193-216)
3: PROTEIN_KINASE_ST (A:310-322)
4: AGC_KINASE_CTER (A:453-518)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RGS
PS50132
RGS domain profile.
RK_BOVIN
63-172
1
A:63-172
2
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
RK_BOVIN
193-216
1
A:193-216
3
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
RK_BOVIN
310-322
1
A:310-322
4
AGC_KINASE_CTER
PS51285
AGC-kinase C-terminal domain profile.
RK_BOVIN
453-518
1
A:453-518
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Exons
(7, 7)
Info
All Exons
Exon 1.1 (A:30-230)
Exon 1.2 (A:231-252)
Exon 1.6a (A:252-326)
Exon 1.7 (A:326-354)
Exon 1.8 (A:354-395)
Exon 1.9 (A:396-463)
Exon 1.10 (A:463-532 (gaps))
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/1.6a
4: Boundary 1.6a/1.7
5: Boundary 1.7/1.8
6: Boundary 1.8/1.9
7: Boundary 1.9/1.10
8: Boundary 1.10/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSBTAT00000045068
1
ENSBTAE00000216442
chr12:
84918428-84919117
690
RK_BOVIN
1-230
230
1
A:30-230
201
1.2
ENSBTAT00000045068
2
ENSBTAE00000413180
chr12:
84920231-84920294
64
RK_BOVIN
231-252
22
1
A:231-252
22
1.6a
ENSBTAT00000045068
6a
ENSBTAE00000334122
chr12:
84924790-84925011
222
RK_BOVIN
252-326
75
1
A:252-326
75
1.7
ENSBTAT00000045068
7
ENSBTAE00000400759
chr12:
84925672-84925755
84
RK_BOVIN
326-354
29
1
A:326-354
29
1.8
ENSBTAT00000045068
8
ENSBTAE00000334116
chr12:
84936606-84936730
125
RK_BOVIN
354-395
42
1
A:354-395
42
1.9
ENSBTAT00000045068
9
ENSBTAE00000334112
chr12:
84938172-84938373
202
RK_BOVIN
396-463
68
1
A:396-463
68
1.10
ENSBTAT00000045068
10
ENSBTAE00000334107
chr12:
84939509-84939807
299
RK_BOVIN
463-561
99
1
A:463-532 (gaps)
70
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SCOP Domains
(0, 0)
Info
All SCOP Domains
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Chain A
Asymmetric Unit 1
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Asym.Unit (178 KB)
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