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3T3Z
Biol. Unit 6
Info
Asym.Unit (332 KB)
Biol.Unit 1 (85 KB)
Biol.Unit 2 (85 KB)
Biol.Unit 3 (84 KB)
Biol.Unit 4 (85 KB)
Biol.Unit 5 (164 KB)
Biol.Unit 6 (165 KB)
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(1)
Title
:
HUMAN CYTOCHROME P450 2E1 IN COMPLEX WITH PILOCARPINE
Authors
:
K. M. Meneely, N. M. Devore, E. E. Scott
Date
:
25 Jul 11 (Deposition) - 07 Dec 11 (Release) - 06 Jun 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.35
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: A,C (1x)
Biol. Unit 6: B,D (1x)
Keywords
:
Cyp2E1, Cytochrome P450 2E1, P450 2E1, Heme Protein, Monooxygenase, Drug Metabolism, Xenobiotic Metabolism, Endoplasmic Reticulum, Membrane, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. M. Devore, K. M. Meneely, A. G. Bart, E. S. Stephens, K. P. Battaile, E. E. Scott
Structural Comparison Of Cytochromes P450 2A6, 2A13, And 2E With Pilocarpine.
Febs J. V. 279 1621 2012
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Hetero Components
(3, 6)
Info
All Hetero Components
1a: (3S,4R)-3-ETHYL-4-[(1-METHYL-1H-IM... (9PLa)
1b: (3S,4R)-3-ETHYL-4-[(1-METHYL-1H-IM... (9PLb)
1c: (3S,4R)-3-ETHYL-4-[(1-METHYL-1H-IM... (9PLc)
1d: (3S,4R)-3-ETHYL-4-[(1-METHYL-1H-IM... (9PLd)
2a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
2b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
2c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
2d: PROTOPORPHYRIN IX CONTAINING FE (HEMd)
3a: SUCROSE (SUCa)
3b: SUCROSE (SUCb)
3c: SUCROSE (SUCc)
3d: SUCROSE (SUCd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
9PL
2
Ligand/Ion
(3S,4R)-3-ETHYL-4-[(1-METHYL-1H-IMIDAZOL-5-YL)METHYL]DIHYDROFURAN-2(3H)-ONE
2
HEM
2
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
3
SUC
2
Ligand/Ion
SUCROSE
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Sites
(6, 6)
Info
All Sites
1: AC4 (SOFTWARE)
2: AC5 (SOFTWARE)
3: AC6 (SOFTWARE)
4: BC1 (SOFTWARE)
5: BC2 (SOFTWARE)
6: BC3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC4
SOFTWARE
ARG B:100 , ILE B:114 , ILE B:115 , TRP B:122 , ARG B:126 , ILE B:180 , ALA B:299 , GLY B:300 , THR B:303 , THR B:307 , ASN B:367 , LEU B:368 , HIS B:370 , LEU B:393 , PHE B:430 , SER B:431 , ARG B:435 , CYS B:437 , GLY B:439 , 9PL B:501
BINDING SITE FOR RESIDUE HEM B 500
2
AC5
SOFTWARE
PHE B:106 , PHE B:207 , ALA B:299 , THR B:303 , HEM B:500
BINDING SITE FOR RESIDUE 9PL B 501
3
AC6
SOFTWARE
PHE B:37 , PHE B:46 , GLN B:47 , HOH B:532 , HOH B:568 , HOH B:659 , HOH B:683 , TRP D:214 , LEU D:217
BINDING SITE FOR RESIDUE SUC B 1
4
BC1
SOFTWARE
ARG D:100 , ILE D:114 , ILE D:115 , TRP D:122 , ARG D:126 , ILE D:180 , LEU D:296 , ALA D:299 , GLY D:300 , THR D:303 , THR D:307 , ASN D:367 , LEU D:368 , HIS D:370 , LEU D:393 , PRO D:429 , PHE D:430 , SER D:431 , ARG D:435 , CYS D:437 , ALA D:438 , GLY D:439 , ALA D:443 , 9PL D:501
BINDING SITE FOR RESIDUE HEM D 500
5
BC2
SOFTWARE
PHE D:207 , PHE D:298 , ALA D:299 , THR D:303 , LEU D:368 , PHE D:478 , HEM D:500
BINDING SITE FOR RESIDUE 9PL D 501
6
BC3
SOFTWARE
PRO B:213 , TRP B:214 , PHE D:37 , PHE D:46 , GLN D:47 , HOH D:547 , HOH D:594
BINDING SITE FOR RESIDUE SUC D 1
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SAPs(SNPs)/Variants
(6, 12)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_008360 (R76H, chain B/D, )
2: VAR_008361 (V179I, chain B/D, )
3: VAR_055382 (N219D, chain B/D, )
4: VAR_055383 (S366C, chain B/D, )
5: VAR_008362 (V389I, chain B/D, )
6: VAR_024727 (H457L, chain B/D, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_008360
R
76
H
CP2E1_HUMAN
Polymorphism
72559710
B/D
R
76
H
2
UniProt
VAR_008361
V
179
I
CP2E1_HUMAN
Polymorphism
6413419
B/D
V
179
I
3
UniProt
VAR_055382
N
219
D
CP2E1_HUMAN
Polymorphism
41299426
B/D
N
219
D
4
UniProt
VAR_055383
S
366
C
CP2E1_HUMAN
Polymorphism
41299434
B/D
S
366
C
5
UniProt
VAR_008362
V
389
I
CP2E1_HUMAN
Polymorphism
55897648
B/D
V
389
I
6
UniProt
VAR_024727
H
457
L
CP2E1_HUMAN
Polymorphism
28969387
B/D
H
457
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: CYTOCHROME_P450 (B:430-439,D:430-439)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CYTOCHROME_P450
PS00086
Cytochrome P450 cysteine heme-iron ligand signature.
CP2E1_HUMAN
430-439
2
-
B:430-439
-
D:430-439
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Exons
(0, 0)
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SCOP Domains
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CATH Domains
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Sorry, no Info available
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Pfam Domains
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Sorry, no Info available
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Asymmetric Unit 1
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Asym.Unit (332 KB)
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Biol.Unit 3 (84 KB)
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