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3SXL
Biol. Unit 3
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Asym.Unit (81 KB)
Biol.Unit 1 (27 KB)
Biol.Unit 2 (27 KB)
Biol.Unit 3 (27 KB)
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(1)
Title
:
SEX-LETHAL RNA RECOGNITION DOMAINS 1 AND 2 FROM DROSOPHILA MELANOGASTER
Authors
:
S. M. Crowder, R. Kanaar, D. C. Rio, T. C. Alber
Date
:
04 Apr 99 (Deposition) - 27 Apr 99 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Keywords
:
Rna Binding Domain, Rbd, Rna Recognition Motif, Rrm, Splicing Inhibitor, Translational Inhibitor, Sex Determination, X Chromosome Dosage Compensation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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Reference
:
S. M. Crowder, R. Kanaar, D. C. Rio, T. Alber
Absence Of Interdomain Contacts In The Crystal Structure Of The Rna Recognition Motifs Of Sex-Lethal.
Proc. Natl. Acad. Sci. Usa V. 96 4892 1999
(for further references see the
PDB file header
)
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Hetero Components
(1, 3)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1b: SELENOMETHIONINE (MSEb)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
1i: SELENOMETHIONINE (MSEi)
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No.
Name
Count
Type
Full Name
1
MSE
3
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(0, 0)
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PROSITE Patterns/Profiles
(1, 2)
Info
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1: RRM (C:211-289)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RRM
PS50102
Eukaryotic RNA Recognition Motif (RRM) profile.
SXL_DROME
125-203
211-291
2
-
-
C:125-203
-
-
C:211-289
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d3sxla1 (A:124-203)
1b: SCOP_d3sxla2 (A:206-289)
1c: SCOP_d3sxlb1 (B:124-203)
1d: SCOP_d3sxlb2 (B:206-289)
1e: SCOP_d3sxlc1 (C:124-203)
1f: SCOP_d3sxlc2 (C:206-289)
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ferredoxin-like
(1795)
Superfamily
:
RNA-binding domain, RBD
(289)
Family
:
Canonical RBD
(214)
Protein domain
:
Sex-lethal protein
(4)
Fruit fly (Drosophila melanogaster) [TaxId: 7227]
(4)
1a
d3sxla1
A:124-203
1b
d3sxla2
A:206-289
1c
d3sxlb1
B:124-203
1d
d3sxlb2
B:206-289
1e
d3sxlc1
C:124-203
1f
d3sxlc2
C:206-289
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CATH Domains
(1, 6)
Info
all CATH domains
1a: CATH_3sxlB02 (B:215-284)
1b: CATH_3sxlA02 (A:206-260)
1c: CATH_3sxlC02 (C:215-284)
1d: CATH_3sxlA01 (A:127-197)
1e: CATH_3sxlB01 (B:127-197)
1f: CATH_3sxlC01 (C:127-197)
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Organisms
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(
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Alpha-Beta Plaits
(1688)
Homologous Superfamily
:
[code=3.30.70.330, no name defined]
(307)
Fruit fly (Drosophila melanogaster)
(8)
1a
3sxlB02
B:215-284
1b
3sxlA02
A:206-260
1c
3sxlC02
C:215-284
1d
3sxlA01
A:127-197
1e
3sxlB01
B:127-197
1f
3sxlC01
C:127-197
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Pfam Domains
(1, 6)
Info
all PFAM domains
1a: PFAM_RRM_1_3sxlC01 (C:213-275)
1b: PFAM_RRM_1_3sxlC02 (C:213-275)
1c: PFAM_RRM_1_3sxlC03 (C:213-275)
1d: PFAM_RRM_1_3sxlC04 (C:213-275)
1e: PFAM_RRM_1_3sxlC05 (C:213-275)
1f: PFAM_RRM_1_3sxlC06 (C:213-275)
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Clan
:
RRM
(206)
Family
:
RRM_1
(131)
Drosophila melanogaster (Fruit fly)
(8)
1a
RRM_1-3sxlC01
C:213-275
1b
RRM_1-3sxlC02
C:213-275
1c
RRM_1-3sxlC03
C:213-275
1d
RRM_1-3sxlC04
C:213-275
1e
RRM_1-3sxlC05
C:213-275
1f
RRM_1-3sxlC06
C:213-275
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Asymmetric Unit 1
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Asym.Unit (81 KB)
Header - Asym.Unit
Biol.Unit 1 (27 KB)
Header - Biol.Unit 1
Biol.Unit 2 (27 KB)
Header - Biol.Unit 2
Biol.Unit 3 (27 KB)
Header - Biol.Unit 3
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