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3SX1
Biol. Unit 3
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Asym.Unit (725 KB)
Biol.Unit 1 (481 KB)
Biol.Unit 2 (481 KB)
Biol.Unit 3, α-C (1.4 MB)
Biol.Unit 3 (1.4 MB)
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Title
:
HANSENULA POLYMORPHA COPPER AMINE OXIDASE-1 IN ITS APO FORM
Authors
:
V. J. Klema, B. J. Johnson, C. M. Wilmot
Date
:
14 Jul 11 (Deposition) - 02 May 12 (Release) - 23 Jan 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.73
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (2x)
Biol. Unit 2: B,C (1x)
Biol. Unit 3: A,B,C (2x)
Keywords
:
Oxidoreductase, Peroxisome
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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Reference
:
V. J. Klema, B. J. Johnson, J. P. Klinman, C. M. Wilmot
The Precursor Form Of Hansenula Polymorpha Copper Amine Oxidase 1 In Complex With Cui And Coii.
Acta Crystallogr. , Sect. F V. 68 501 2012
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Hetero Components
(0, 0)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
1g: GLYCEROL (GOLg)
1h: GLYCEROL (GOLh)
1i: GLYCEROL (GOLi)
1j: GLYCEROL (GOLj)
1k: GLYCEROL (GOLk)
1l: GLYCEROL (GOLl)
1m: GLYCEROL (GOLm)
1n: GLYCEROL (GOLn)
2a: PHOSPHATE ION (PO4a)
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Sites
(15, 15)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS C:23 , TYR C:64 , LYS C:68 , LYS C:265 , ASP C:280 , HOH C:989 , HOH C:1975 , HOH C:2352
BINDING SITE FOR RESIDUE GOL C 693
02
AC2
SOFTWARE
HIS A:218 , LYS A:219 , TYR A:448 , TYR A:534
BINDING SITE FOR RESIDUE GOL A 693
03
AC3
SOFTWARE
HIS B:23 , TYR B:64 , LYS B:68 , LYS B:265 , ASP B:280 , HOH B:724
BINDING SITE FOR RESIDUE GOL B 693
04
AC4
SOFTWARE
ARG B:163 , PHE B:310 , HOH B:917 , HOH B:1248 , HOH B:2873 , HOH C:765
BINDING SITE FOR RESIDUE GOL B 694
05
AC5
SOFTWARE
PRO A:442 , PRO A:484 , TYR A:485 , HOH A:852 , HOH A:2150 , HOH A:2814
BINDING SITE FOR RESIDUE GOL A 694
06
AC6
SOFTWARE
ARG C:213 , LYS C:214 , VAL C:215 , GLY C:435 , ASP C:436 , ASN C:450 , HOH C:836 , HOH C:1101
BINDING SITE FOR RESIDUE GOL C 694
07
AC7
SOFTWARE
ARG A:211 , LYS A:214 , VAL A:215 , GLY A:435 , ASP A:436
BINDING SITE FOR RESIDUE GOL A 695
08
AC8
SOFTWARE
GLN A:70 , HIS B:218 , LYS B:219 , TYR B:448 , PRO B:449 , HOH B:1040 , TYR C:534
BINDING SITE FOR RESIDUE GOL B 695
09
AC9
SOFTWARE
GLN A:66 , GLN A:70 , GLY A:72 , HOH A:2485 , TYR C:534 , THR C:650 , HOH C:750
BINDING SITE FOR RESIDUE GOL A 696
10
BC1
SOFTWARE
PRO B:484 , TYR B:485 , TYR B:499 , HOH B:1622
BINDING SITE FOR RESIDUE GOL B 696
11
BC2
SOFTWARE
PRO C:484 , TYR C:485
BINDING SITE FOR RESIDUE GOL C 695
12
BC3
SOFTWARE
ARG C:20 , HIS C:218 , LYS C:219
BINDING SITE FOR RESIDUE PO4 C 696
13
BC4
SOFTWARE
PRO B:442 , HOH B:2980 , PRO C:484
BINDING SITE FOR RESIDUE GOL B 697
14
BC5
SOFTWARE
TRP A:67 , LYS A:68 , HOH A:2024
BINDING SITE FOR RESIDUE GOL A 697
15
BC6
SOFTWARE
GLY A:142 , GLU A:147 , TYR A:177 , HOH A:792 , HOH A:908 , HOH B:2841
BINDING SITE FOR RESIDUE GOL A 698
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 12)
Info
All PROSITE Patterns/Profiles
1: COPPER_AMINE_OXID_1 (A:394-407,B:394-407,C:394-407)
2: COPPER_AMINE_OXID_2 (A:619-632,B:619-632,C:619-632)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
COPPER_AMINE_OXID_1
PS01164
Copper amine oxidase topaquinone signature.
AMO_PICAN
394-407
6
A:394-407
B:394-407
C:394-407
2
COPPER_AMINE_OXID_2
PS01165
Copper amine oxidase copper-binding site signature.
AMO_PICAN
619-632
6
A:619-632
B:619-632
C:619-632
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asym.Unit (725 KB)
Header - Asym.Unit
Biol.Unit 1 (481 KB)
Header - Biol.Unit 1
Biol.Unit 2 (481 KB)
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Biol.Unit 3 (1.4 MB)
Header - Biol.Unit 3
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