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3SSU
Asym. Unit
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Asym.Unit (38 KB)
Biol.Unit 1 (33 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF VIMENTIN COIL1A/1B FRAGMENT
Authors
:
S. Nicolet, A. A. Chernyatina, S. V. Strelkov
Date
:
08 Jul 11 (Deposition) - 15 Aug 12 (Release) - 03 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Cytoskeleton, Intermediate Filament, Alpha-Helix, Structural Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. A. Chernyatina, S. Nicolet, U. Aebi, H. Herrmann, S. V. Strelkov
Atomic Structure Of The Vimentin Central Alpha-Helical Domain And Its Implications For Intermediate Filament Assembly.
Proc. Natl. Acad. Sci. Usa V. 109 13620 2012
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(1, 2)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_070100 (E151K, chain A/B, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_070100
E
151
K
VIME_HUMAN
Unclassified
---
A/B
E
151
K
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
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Exons
(2, 3)
Info
All Exons
Exon 1.3d (A:144-188 | B:149-187)
Exon 1.4c (A:188-189 | -)
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1: Boundary -/1.3d
2: Boundary 1.3d/1.4c
3: Boundary 1.4c/1.5b
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.3d
ENST00000224237
3d
ENSE00002186269
chr10:
17271277-17271984
708
VIME_HUMAN
1-188
188
2
A:144-188
B:149-187
45
39
1.4c
ENST00000224237
4c
ENSE00001270958
chr10:
17272649-17272709
61
VIME_HUMAN
188-208
21
1
A:188-189
-
2
-
1.5b
ENST00000224237
5b
ENSE00000692805
chr10:
17275586-17275681
96
VIME_HUMAN
209-240
32
0
-
-
1.6
ENST00000224237
6
ENSE00000692809
chr10:
17275769-17275930
162
VIME_HUMAN
241-294
54
0
-
-
1.7a
ENST00000224237
7a
ENSE00000692812
chr10:
17276692-17276817
126
VIME_HUMAN
295-336
42
0
-
-
1.8a
ENST00000224237
8a
ENSE00001270949
chr10:
17277168-17277388
221
VIME_HUMAN
337-410
74
0
-
-
1.8c
ENST00000224237
8c
ENSE00001121153
chr10:
17277845-17277888
44
VIME_HUMAN
410-425
16
0
-
-
1.8e
ENST00000224237
8e
ENSE00000815998
chr10:
17278293-17278378
86
VIME_HUMAN
425-453
29
0
-
-
1.9
ENST00000224237
9
ENSE00001906870
chr10:
17279229-17279592
364
VIME_HUMAN
454-466
13
0
-
-
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