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3SSB
Biol. Unit 1
Info
Asym.Unit (275 KB)
Biol.Unit 1 (138 KB)
Biol.Unit 2 (134 KB)
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(1)
Title
:
STRUCTURE OF INSECT METALLOPROTEINASE INHIBITOR IN COMPLEX WITH THERMOLYSIN
Authors
:
J. L. Arolas, T. O. Botelho, A. Vilcinskas, F. X. Gomis-Ruth
Date
:
08 Jul 11 (Deposition) - 07 Sep 11 (Release) - 02 Nov 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B,C,D,I,J
Biol. Unit 1: A,C,I (1x)
Biol. Unit 2: B,D,J (1x)
Keywords
:
Thermolysin Fold - Family I8 Fold, Metalloprotease Thermolysin Inhibitor, Zn Binding, Secreted, Hydrolase-Hydrolase Inhibitor Complex
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Gene Ontology, PubMed, Web (Google)
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Reference
:
J. L. Arolas, T. O. Botelho, A. Vilcinskas, F. X. Gomis-Ruth
Structural Evidence For Standard-Mechanism Inhibition In Metallopeptidases From A Complex Poised To Resynthesize A Peptide Bond.
Angew. Chem. Int. Ed. Engl. V. 50 10357 2011
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
1f: CALCIUM ION (CAf)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
3a: SODIUM ION (NAa)
3b: SODIUM ION (NAb)
4a: ZINC ION (ZNa)
4b: ZINC ION (ZNb)
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No.
Name
Count
Type
Full Name
1
CA
-1
Ligand/Ion
CALCIUM ION
2
GOL
2
Ligand/Ion
GLYCEROL
3
NA
-1
Ligand/Ion
SODIUM ION
4
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC3 (SOFTWARE)
3: AC4 (SOFTWARE)
4: AC5 (SOFTWARE)
5: AC6 (SOFTWARE)
6: AC7 (SOFTWARE)
7: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:109 , TYR A:110 , ASN A:111 , ASN I:60 , ASP I:61 , LYS I:62 , HOH I:644 , HOH I:650
BINDING SITE FOR RESIDUE GOL I 501
2
AC3
SOFTWARE
TYR A:66 , SER B:218 , LYS B:219 , TYR B:251
BINDING SITE FOR RESIDUE GOL A 503
3
AC4
SOFTWARE
HIS A:142 , HIS A:146 , GLU A:166 , ASN C:56
BINDING SITE FOR RESIDUE ZN A 999
4
AC5
SOFTWARE
ASP A:57 , ASP A:59 , GLN A:61 , HOH A:599 , HOH A:600
BINDING SITE FOR RESIDUE CA A 998
5
AC6
SOFTWARE
ASP A:138 , GLU A:177 , ASP A:185 , GLU A:187 , GLU A:190 , HOH A:656
BINDING SITE FOR RESIDUE CA A 997
6
AC7
SOFTWARE
TYR A:193 , THR A:194 , ILE A:197 , ASP A:200 , HOH A:659 , HOH A:695
BINDING SITE FOR RESIDUE CA A 996
7
AC8
SOFTWARE
GLU A:177 , ASN A:183 , ASP A:185 , GLU A:190 , HOH A:525 , HOH A:533
BINDING SITE FOR RESIDUE NA A 995
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: ZINC_PROTEASE (A:139-148)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZINC_PROTEASE
PS00142
Neutral zinc metallopeptidases, zinc-binding region signature.
THER_BACTH
371-380
1
A:139-148
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3ssba_ (A:)
1b: SCOP_d3ssbb_ (B:)
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Protein Domains
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Organisms
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(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Zincin-like
(701)
Superfamily
:
Metalloproteases (zincins), catalytic domain
(647)
Family
:
Thermolysin-like
(130)
Protein domain
:
Thermolysin
(121)
Bacillus thermoproteolyticus [TaxId: 1427]
(121)
1a
d3ssba_
A:
1b
d3ssbb_
B:
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CATH Domains
(0, 0)
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Pfam Domains
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (275 KB)
Header - Asym.Unit
Biol.Unit 1 (138 KB)
Header - Biol.Unit 1
Biol.Unit 2 (134 KB)
Header - Biol.Unit 2
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