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3SQV
Biol. Unit 1
Info
Asym.Unit (482 KB)
Biol.Unit 1 (236 KB)
Biol.Unit 2 (237 KB)
Biol.Unit 3 (469 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF E. COLI O157:H7 E3 UBIQUITIN LIGASE, NLEL, WITH A HUMAN E2, UBCH7
Authors
:
D. Y. Lin, J. Chen
Date
:
06 Jul 11 (Deposition) - 25 Jan 12 (Release) - 22 Feb 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.30
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Biol. Unit 3: A,B,C,D (1x)
Keywords
:
Effector Protein, Pentapeptide, Hect Domain, Hect E3 Ubiquitin Ligase, E2 Ubiquitin Conjugating Enzyme, Protein-Protein Complex, Ubiquitin Transfer, Ubiquitin, Ubiquitination, Ligase-Signaling Protein Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
D. Y. Lin, J. Diao, J. Chen
Crystal Structures Of Two Bacterial Hect-Like E3 Ligases In Complex With A Human E2 Reveal Atomic Details Of Pathogen-Host Interactions.
Proc. Natl. Acad. Sci. Usa V. 109 1925 2012
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Hetero Components
(2, 9)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
2d: SULFATE ION (SO4d)
2e: SULFATE ION (SO4e)
2f: SULFATE ION (SO4f)
2g: SULFATE ION (SO4g)
2h: SULFATE ION (SO4h)
2i: SULFATE ION (SO4i)
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No.
Name
Count
Type
Full Name
1
GOL
3
Ligand/Ion
GLYCEROL
2
SO4
6
Ligand/Ion
SULFATE ION
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: BC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:486 , MET A:487 , GLN A:488 , GLU A:489
BINDING SITE FOR RESIDUE SO4 A 2
2
AC2
SOFTWARE
HIS A:463 , PRO A:464 , GLY A:465
BINDING SITE FOR RESIDUE SO4 A 4
3
AC3
SOFTWARE
ASN A:217
BINDING SITE FOR RESIDUE SO4 A 5
4
AC4
SOFTWARE
ALA A:183 , TRP A:187 , SER B:212 , ASP B:232
BINDING SITE FOR RESIDUE SO4 A 6
5
AC5
SOFTWARE
ASP A:322
BINDING SITE FOR RESIDUE SO4 A 7
6
AC6
SOFTWARE
LYS A:283 , THR A:305 , LYS A:324 , LYS B:283
BINDING SITE FOR RESIDUE GOL A 783
7
BC1
SOFTWARE
GLY C:-1
BINDING SITE FOR RESIDUE GOL C 155
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: UBIQUITIN_CONJUGAT_2 (C:5-138)
2: UBIQUITIN_CONJUGAT_1 (C:75-90)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
UBIQUITIN_CONJUGAT_2
PS50127
Ubiquitin-conjugating enzymes family profile.
UB2L3_HUMAN
5-138
1
C:5-138
-
2
UBIQUITIN_CONJUGAT_1
PS00183
Ubiquitin-conjugating enzymes active site.
UB2L3_HUMAN
75-90
1
C:75-90
-
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Exons
(0, 0)
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SCOP Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (482 KB)
Header - Asym.Unit
Biol.Unit 1 (236 KB)
Header - Biol.Unit 1
Biol.Unit 2 (237 KB)
Header - Biol.Unit 2
Biol.Unit 3 (469 KB)
Header - Biol.Unit 3
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