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3SM9
Asym. Unit
Info
Asym.Unit (80 KB)
Biol.Unit 1 (148 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF METABOTROPIC GLUTAMATE RECEPTOR 3 PRECURSOR IN PRESENCE OF LY341495 ANTAGONIST
Authors
:
A. K. Wernimont, A. Dong, A. Seitova, L. Crombet, G. Khutoreskaya, A. M. C. H. Arrowsmith, C. Bountra, J. Weigelt, D. Cossar, E. Dobrovetsky, S Genomics Consortium (Sgc)
Date
:
27 Jun 11 (Deposition) - 27 Jul 11 (Release) - 27 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.26
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Structural Genomics, Structural Genomics Consortium, Sgc, Cell Membrane, G-Protein Coupled Receptor, Glycoprotein, Membrane, Olfaction, Phosphoprotein, Receptor, Sensory Transduction, Transducer, Transmembrane, Transmembrane Helix, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. K. Wernimont, A. Dong, A. Seitova, L. Crombet, G. Khutoreskaya, A. M. Edwards, C. H. Arrowsmith, C. Bountra, J. Weigelt, D. Cossar, E. Dobrovetsky
Crystal Structure Of Metabotropic Glutamate Receptor 3 Precursor In Presence Of Ly341495 Antagonist
To Be Published
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Hetero Components
(3, 8)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
2d: SULFATE ION (SO4d)
2e: SULFATE ION (SO4e)
3a: 2-[(1S,2S)-2-CARBOXYCYCLOPROPYL]-3... (Z99a)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
2
Ligand/Ion
CHLORIDE ION
2
SO4
5
Ligand/Ion
SULFATE ION
3
Z99
1
Ligand/Ion
2-[(1S,2S)-2-CARBOXYCYCLOPROPYL]-3-(9H-XANTHEN-9-YL)-D-ALANINE
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLN A:131 , ASN A:134 , ARG A:137 , HOH A:588
BINDING SITE FOR RESIDUE SO4 A 480
2
AC2
SOFTWARE
ARG A:76 , ASP A:77 , THR A:78
BINDING SITE FOR RESIDUE SO4 A 481
3
AC3
SOFTWARE
ARG A:252 , SER A:253 , ASP A:254
BINDING SITE FOR RESIDUE SO4 A 482
4
AC4
SOFTWARE
GLN A:281 , GLU A:282 , SER A:283
BINDING SITE FOR RESIDUE SO4 A 483
5
AC5
SOFTWARE
ASP A:432 , THR A:433 , PHE A:434
BINDING SITE FOR RESIDUE SO4 A 484
6
AC6
SOFTWARE
ARG A:39 , ARG A:43 , SER A:124 , TYR A:125 , SER A:126 , ALA A:147 , SER A:148 , THR A:149 , TYR A:197 , LYS A:364 , HOH A:525 , HOH A:544 , HOH A:545
BINDING SITE FOR RESIDUE Z99 A 485
7
AC7
SOFTWARE
THR A:73 , SER A:124 , TYR A:125 , VAL A:128
BINDING SITE FOR RESIDUE CL A 486
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_049274 (G450D, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_049274
G
475
D
GRM3_HUMAN
Polymorphism
17161026
A
G
450
D
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: G_PROTEIN_RECEP_F3_1 (A:132-150)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
G_PROTEIN_RECEP_F3_1
PS00979
G-protein coupled receptors family 3 signature 1.
GRM3_HUMAN
157-175
1
A:132-150
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Exons
(3, 3)
Info
All Exons
Exon 1.3c (A:5-131 (gaps))
Exon 1.4b (A:132-417 (gaps))
Exon 1.5 (A:417-475 (gaps))
View:
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All Exon Boundaries
1: Boundary 1.1b/1.3c
2: Boundary 1.3c/1.4b
3: Boundary 1.4b/1.5
4: Boundary 1.5/1.6
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000361669
1b
ENSE00001893578
chr7:
86273230-86274188
959
GRM3_HUMAN
-
0
0
-
-
1.3c
ENST00000361669
3c
ENSE00001254415
chr7:
86394322-86394929
608
GRM3_HUMAN
1-156
156
1
A:5-131 (gaps)
127
1.4b
ENST00000361669
4b
ENSE00001254406
chr7:
86415577-86416432
856
GRM3_HUMAN
157-442
286
1
A:132-417 (gaps)
286
1.5
ENST00000361669
5
ENSE00000700691
chr7:
86468155-86469221
1067
GRM3_HUMAN
442-797
356
1
A:417-475 (gaps)
59
1.6
ENST00000361669
6
ENSE00001801909
chr7:
86479686-86479860
175
GRM3_HUMAN
798-856
59
0
-
-
1.7c
ENST00000361669
7c
ENSE00001621224
chr7:
86493598-86494200
603
GRM3_HUMAN
856-879
24
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3sm9a_ (A:)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Periplasmic binding protein-like I
(179)
Superfamily
:
Periplasmic binding protein-like I
(179)
Family
:
automated matches
(65)
Protein domain
:
automated matches
(65)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d3sm9a_
A:
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CATH Domains
(0, 0)
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all CATH domains
View:
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Sorry, no Info available
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Pfam Domains
(0, 0)
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Sorry, no Info available
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Chain A
Asymmetric Unit 1
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