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3SLH
Biol. Unit 3
Info
Asym.Unit (630 KB)
Biol.Unit 1 (164 KB)
Biol.Unit 2 (160 KB)
Biol.Unit 3 (159 KB)
Biol.Unit 4 (158 KB)
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(1)
Title
:
1.70 ANGSTROM RESOLUTION STRUCTURE OF 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE (AROA) FROM COXIELLA BURNETII IN COMPLEX WITH SHIKIMATE-3-PHOSPHATE AND GLYPHOSATE
Authors
:
S. H. Light, G. Minasov, E. V. Filippova, S. N. Krishna, L. Shuvalova, L. W. F. Anderson, Center For Structural Genomics Of Infectious D (Csgid)
Date
:
24 Jun 11 (Deposition) - 20 Jul 11 (Release) - 20 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, 3-Phosphoshikimate 1-Carboxyvinyltransferase Activity, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. H. Light, G. Minasov, E. V. Filippova, S. N. Krishna, L. Shuvalova, L. Papazisi, W. F. Anderson, Center For Structural Genomics Of Infectious Diseases (Csgid)
1. 70 Angstrom Resolution Structure Of 3-Phosphoshikimate 1-Carboxyvinyltransferase(Aroa) From Coxiella Burnetii In Complex With Shikimate-3-Phosphate And Glyphosate
To Be Published
[
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Hetero Components
(8, 11)
Info
All Hetero Components
1a: PENTAETHYLENE GLYCOL (1PEa)
2a: BETA-MERCAPTOETHANOL (BMEa)
2b: BETA-MERCAPTOETHANOL (BMEb)
2c: BETA-MERCAPTOETHANOL (BMEc)
2d: BETA-MERCAPTOETHANOL (BMEd)
2e: BETA-MERCAPTOETHANOL (BMEe)
3a: CHLORIDE ION (CLa)
3b: CHLORIDE ION (CLb)
4a: 1,2-ETHANEDIOL (EDOa)
4b: 1,2-ETHANEDIOL (EDOb)
4c: 1,2-ETHANEDIOL (EDOc)
4d: 1,2-ETHANEDIOL (EDOd)
5a: GLYPHOSATE (GPJa)
5b: GLYPHOSATE (GPJb)
5c: GLYPHOSATE (GPJc)
5d: GLYPHOSATE (GPJd)
5e: GLYPHOSATE (GPJe)
6a: DI(HYDROXYETHYL)ETHER (PEGa)
6b: DI(HYDROXYETHYL)ETHER (PEGb)
6c: DI(HYDROXYETHYL)ETHER (PEGc)
6d: DI(HYDROXYETHYL)ETHER (PEGd)
6e: DI(HYDROXYETHYL)ETHER (PEGe)
6f: DI(HYDROXYETHYL)ETHER (PEGf)
6g: DI(HYDROXYETHYL)ETHER (PEGg)
6h: DI(HYDROXYETHYL)ETHER (PEGh)
6i: DI(HYDROXYETHYL)ETHER (PEGi)
6j: DI(HYDROXYETHYL)ETHER (PEGj)
6k: DI(HYDROXYETHYL)ETHER (PEGk)
6l: DI(HYDROXYETHYL)ETHER (PEGl)
6m: DI(HYDROXYETHYL)ETHER (PEGm)
6n: DI(HYDROXYETHYL)ETHER (PEGn)
7a: TETRAETHYLENE GLYCOL (PG4a)
7b: TETRAETHYLENE GLYCOL (PG4b)
7c: TETRAETHYLENE GLYCOL (PG4c)
8a: TRIETHYLENE GLYCOL (PGEa)
9a: PHOSPHATE ION (PO4a)
9b: PHOSPHATE ION (PO4b)
9c: PHOSPHATE ION (PO4c)
9d: PHOSPHATE ION (PO4d)
10a: SHIKIMATE-3-PHOSPHATE (S3Pa)
10b: SHIKIMATE-3-PHOSPHATE (S3Pb)
10c: SHIKIMATE-3-PHOSPHATE (S3Pc)
10d: SHIKIMATE-3-PHOSPHATE (S3Pd)
11a: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHE... (SKMa)
11b: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHE... (SKMb)
11c: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHE... (SKMc)
11d: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHE... (SKMd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
1PE
-1
Ligand/Ion
PENTAETHYLENE GLYCOL
2
BME
1
Ligand/Ion
BETA-MERCAPTOETHANOL
3
CL
-1
Ligand/Ion
CHLORIDE ION
4
EDO
2
Ligand/Ion
1,2-ETHANEDIOL
5
GPJ
1
Ligand/Ion
GLYPHOSATE
6
PEG
2
Ligand/Ion
DI(HYDROXYETHYL)ETHER
7
PG4
2
Ligand/Ion
TETRAETHYLENE GLYCOL
8
PGE
-1
Ligand/Ion
TRIETHYLENE GLYCOL
9
PO4
1
Ligand/Ion
PHOSPHATE ION
10
S3P
1
Ligand/Ion
SHIKIMATE-3-PHOSPHATE
11
SKM
1
Ligand/Ion
(3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLICACID
[
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]
Sites
(13, 13)
Info
All Sites
01: BC7 (SOFTWARE)
02: CC9 (SOFTWARE)
03: DC1 (SOFTWARE)
04: DC2 (SOFTWARE)
05: DC3 (SOFTWARE)
06: DC4 (SOFTWARE)
07: DC5 (SOFTWARE)
08: DC6 (SOFTWARE)
09: DC7 (SOFTWARE)
10: DC8 (SOFTWARE)
11: DC9 (SOFTWARE)
12: EC1 (SOFTWARE)
13: EC2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
BC7
SOFTWARE
GLU B:14 , ARG B:253 , CYS B:255 , ASP B:292 , HOH B:984 , ARG C:155 , ARG C:182
BINDING SITE FOR RESIDUE BME B 439
02
CC9
SOFTWARE
GLU C:14 , ARG C:253 , CYS C:255 , ASP C:292
BINDING SITE FOR RESIDUE BME C 439
03
DC1
SOFTWARE
PRO C:124 , ARG C:127 , HOH C:991
BINDING SITE FOR RESIDUE CL C 440
04
DC2
SOFTWARE
ARG C:127 , SER C:167 , ALA C:168 , GLN C:169 , GLU C:338 , LYS C:342 , SKM C:443 , HOH C:502 , HOH C:585 , HOH C:622 , HOH C:1220 , HOH C:1262
BINDING SITE FOR RESIDUE PO4 C 441
05
DC3
SOFTWARE
LYS C:21 , ASN C:93 , GLY C:95 , THR C:96 , ARG C:123 , GLN C:169 , ASP C:315 , GLU C:343 , ARG C:346 , HIS C:386 , ARG C:387 , SKM C:443 , S3P C:444 , HOH C:548 , HOH C:622 , HOH C:638
BINDING SITE FOR RESIDUE GPJ C 442
06
DC4
SOFTWARE
LYS C:21 , SER C:22 , ARG C:26 , THR C:96 , ALA C:168 , GLN C:169 , ARG C:194 , ASP C:315 , LYS C:342 , PO4 C:441 , GPJ C:442 , HOH C:622
BINDING SITE FOR RESIDUE SKM C 443
07
DC5
SOFTWARE
LYS C:21 , SER C:22 , ARG C:26 , THR C:96 , SER C:167 , ALA C:168 , GLN C:169 , ARG C:194 , ASP C:315 , LYS C:342 , GPJ C:442 , HOH C:502 , HOH C:585 , HOH C:622 , HOH C:1220 , HOH C:1262
BINDING SITE FOR RESIDUE S3P C 444
08
DC6
SOFTWARE
THR C:344 , ALA C:348 , TYR C:383 , HOH C:1561 , HOH C:1562
BINDING SITE FOR RESIDUE PEG C 445
09
DC7
SOFTWARE
PRO C:7 , SER C:8 , GLN C:9 , ASN C:428 , HOH C:534
BINDING SITE FOR RESIDUE PG4 C 446
10
DC8
SOFTWARE
GLN C:4 , ILE C:6 , ASN C:423 , VAL C:429 , LYS C:430
BINDING SITE FOR RESIDUE PEG C 447
11
DC9
SOFTWARE
ILE C:6 , PRO C:7 , LYS C:400
BINDING SITE FOR RESIDUE EDO C 448
12
EC1
SOFTWARE
ARG C:253 , ARG C:296 , HOH C:939
BINDING SITE FOR RESIDUE EDO C 449
13
EC2
SOFTWARE
LYS C:202 , LEU C:208 , LYS C:210
BINDING SITE FOR RESIDUE PG4 C 450
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: EPSP_SYNTHASE_1 (C:89-103)
2: EPSP_SYNTHASE_2 (C:340-358)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EPSP_SYNTHASE_1
PS00104
EPSP synthase signature 1.
AROA_COXBU
89-103
1
-
-
C:89-103
-
2
EPSP_SYNTHASE_2
PS00885
EPSP synthase signature 2.
AROA_COXBU
340-358
1
-
-
C:340-358
-
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3slha_ (A:)
1b: SCOP_d3slhb_ (B:)
1c: SCOP_d3slhc_ (C:)
1d: SCOP_d3slhd_ (D:)
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(
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(
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Protein Domains
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(
)
Organisms
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)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
IF3-like
(127)
Superfamily
:
EPT/RTPC-like
(82)
Family
:
automated matches
(12)
Protein domain
:
automated matches
(12)
Coxiella burnetii [TaxId: 227377]
(3)
1a
d3slha_
A:
1b
d3slhb_
B:
1c
d3slhc_
C:
1d
d3slhd_
D:
[
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain C
Asymmetric Unit 1
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