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3SLH
Biol. Unit 2
Info
Asym.Unit (630 KB)
Biol.Unit 1 (164 KB)
Biol.Unit 2 (160 KB)
Biol.Unit 3 (159 KB)
Biol.Unit 4 (158 KB)
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(1)
Title
:
1.70 ANGSTROM RESOLUTION STRUCTURE OF 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE (AROA) FROM COXIELLA BURNETII IN COMPLEX WITH SHIKIMATE-3-PHOSPHATE AND GLYPHOSATE
Authors
:
S. H. Light, G. Minasov, E. V. Filippova, S. N. Krishna, L. Shuvalova, L. W. F. Anderson, Center For Structural Genomics Of Infectious D (Csgid)
Date
:
24 Jun 11 (Deposition) - 20 Jul 11 (Release) - 20 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, 3-Phosphoshikimate 1-Carboxyvinyltransferase Activity, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. H. Light, G. Minasov, E. V. Filippova, S. N. Krishna, L. Shuvalova, L. Papazisi, W. F. Anderson, Center For Structural Genomics Of Infectious Diseases (Csgid)
1. 70 Angstrom Resolution Structure Of 3-Phosphoshikimate 1-Carboxyvinyltransferase(Aroa) From Coxiella Burnetii In Complex With Shikimate-3-Phosphate And Glyphosate
To Be Published
[
close entry info
]
Hetero Components
(8, 11)
Info
All Hetero Components
1a: PENTAETHYLENE GLYCOL (1PEa)
2a: BETA-MERCAPTOETHANOL (BMEa)
2b: BETA-MERCAPTOETHANOL (BMEb)
2c: BETA-MERCAPTOETHANOL (BMEc)
2d: BETA-MERCAPTOETHANOL (BMEd)
2e: BETA-MERCAPTOETHANOL (BMEe)
3a: CHLORIDE ION (CLa)
3b: CHLORIDE ION (CLb)
4a: 1,2-ETHANEDIOL (EDOa)
4b: 1,2-ETHANEDIOL (EDOb)
4c: 1,2-ETHANEDIOL (EDOc)
4d: 1,2-ETHANEDIOL (EDOd)
5a: GLYPHOSATE (GPJa)
5b: GLYPHOSATE (GPJb)
5c: GLYPHOSATE (GPJc)
5d: GLYPHOSATE (GPJd)
5e: GLYPHOSATE (GPJe)
6a: DI(HYDROXYETHYL)ETHER (PEGa)
6b: DI(HYDROXYETHYL)ETHER (PEGb)
6c: DI(HYDROXYETHYL)ETHER (PEGc)
6d: DI(HYDROXYETHYL)ETHER (PEGd)
6e: DI(HYDROXYETHYL)ETHER (PEGe)
6f: DI(HYDROXYETHYL)ETHER (PEGf)
6g: DI(HYDROXYETHYL)ETHER (PEGg)
6h: DI(HYDROXYETHYL)ETHER (PEGh)
6i: DI(HYDROXYETHYL)ETHER (PEGi)
6j: DI(HYDROXYETHYL)ETHER (PEGj)
6k: DI(HYDROXYETHYL)ETHER (PEGk)
6l: DI(HYDROXYETHYL)ETHER (PEGl)
6m: DI(HYDROXYETHYL)ETHER (PEGm)
6n: DI(HYDROXYETHYL)ETHER (PEGn)
7a: TETRAETHYLENE GLYCOL (PG4a)
7b: TETRAETHYLENE GLYCOL (PG4b)
7c: TETRAETHYLENE GLYCOL (PG4c)
8a: TRIETHYLENE GLYCOL (PGEa)
9a: PHOSPHATE ION (PO4a)
9b: PHOSPHATE ION (PO4b)
9c: PHOSPHATE ION (PO4c)
9d: PHOSPHATE ION (PO4d)
10a: SHIKIMATE-3-PHOSPHATE (S3Pa)
10b: SHIKIMATE-3-PHOSPHATE (S3Pb)
10c: SHIKIMATE-3-PHOSPHATE (S3Pc)
10d: SHIKIMATE-3-PHOSPHATE (S3Pd)
11a: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHE... (SKMa)
11b: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHE... (SKMb)
11c: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHE... (SKMc)
11d: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHE... (SKMd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
1PE
1
Ligand/Ion
PENTAETHYLENE GLYCOL
2
BME
1
Ligand/Ion
BETA-MERCAPTOETHANOL
3
CL
-1
Ligand/Ion
CHLORIDE ION
4
EDO
-1
Ligand/Ion
1,2-ETHANEDIOL
5
GPJ
2
Ligand/Ion
GLYPHOSATE
6
PEG
3
Ligand/Ion
DI(HYDROXYETHYL)ETHER
7
PG4
-1
Ligand/Ion
TETRAETHYLENE GLYCOL
8
PGE
1
Ligand/Ion
TRIETHYLENE GLYCOL
9
PO4
1
Ligand/Ion
PHOSPHATE ION
10
S3P
1
Ligand/Ion
SHIKIMATE-3-PHOSPHATE
11
SKM
1
Ligand/Ion
(3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLICACID
[
close Hetero Component info
]
Sites
(11, 11)
Info
All Sites
01: BC7 (SOFTWARE)
02: BC8 (SOFTWARE)
03: BC9 (SOFTWARE)
04: CC1 (SOFTWARE)
05: CC2 (SOFTWARE)
06: CC3 (SOFTWARE)
07: CC4 (SOFTWARE)
08: CC5 (SOFTWARE)
09: CC6 (SOFTWARE)
10: CC7 (SOFTWARE)
11: CC8 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
BC7
SOFTWARE
GLU B:14 , ARG B:253 , CYS B:255 , ASP B:292 , HOH B:984 , ARG C:155 , ARG C:182
BINDING SITE FOR RESIDUE BME B 439
02
BC8
SOFTWARE
ARG B:127 , SER B:167 , ALA B:168 , GLN B:169 , GLU B:338 , LYS B:342 , SKM B:443 , HOH B:483 , HOH B:527 , HOH B:529 , HOH B:565 , HOH B:596
BINDING SITE FOR RESIDUE PO4 B 440
03
BC9
SOFTWARE
LYS B:21 , SER B:22 , ARG B:26 , THR B:96 , SER B:167 , ALA B:168 , GLN B:169 , ARG B:194 , ASP B:315 , LYS B:342 , GPJ B:442 , HOH B:483 , HOH B:527 , HOH B:529 , HOH B:565 , HOH B:596
BINDING SITE FOR RESIDUE S3P B 441
04
CC1
SOFTWARE
LYS B:21 , ASN B:93 , GLY B:95 , THR B:96 , ARG B:123 , GLN B:169 , ASP B:315 , GLU B:343 , ARG B:346 , HIS B:386 , ARG B:387 , S3P B:441 , SKM B:443 , HOH B:480 , HOH B:579 , HOH B:596
BINDING SITE FOR RESIDUE GPJ B 442
05
CC2
SOFTWARE
LYS B:21 , SER B:22 , ARG B:26 , THR B:96 , ALA B:168 , GLN B:169 , ARG B:194 , ASP B:315 , LYS B:342 , PO4 B:440 , GPJ B:442
BINDING SITE FOR RESIDUE SKM B 443
06
CC3
SOFTWARE
ARG A:435 , GLY B:36 , GLN B:37 , ASN B:226 , ASP B:227
BINDING SITE FOR RESIDUE GPJ B 444
07
CC4
SOFTWARE
MET B:1 , GLY B:431 , ARG B:433
BINDING SITE FOR RESIDUE PEG B 445
08
CC5
SOFTWARE
LYS B:210 , ASP B:211 , GLN B:213 , SER B:214 , ILE B:215
BINDING SITE FOR RESIDUE PEG B 446
09
CC6
SOFTWARE
ARG B:340 , PRO B:365
BINDING SITE FOR RESIDUE PGE B 447
10
CC7
SOFTWARE
ALA B:348 , TYR B:383 , HOH B:1249
BINDING SITE FOR RESIDUE PEG B 448
11
CC8
SOFTWARE
GLU B:198 , LYS B:202 , LEU B:208 , ILE B:215 , GLU B:287
BINDING SITE FOR RESIDUE 1PE B 449
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: EPSP_SYNTHASE_1 (B:89-103)
2: EPSP_SYNTHASE_2 (B:340-358)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EPSP_SYNTHASE_1
PS00104
EPSP synthase signature 1.
AROA_COXBU
89-103
1
-
B:89-103
-
-
2
EPSP_SYNTHASE_2
PS00885
EPSP synthase signature 2.
AROA_COXBU
340-358
1
-
B:340-358
-
-
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3slha_ (A:)
1b: SCOP_d3slhb_ (B:)
1c: SCOP_d3slhc_ (C:)
1d: SCOP_d3slhd_ (D:)
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Protein Domains
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(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
IF3-like
(127)
Superfamily
:
EPT/RTPC-like
(82)
Family
:
automated matches
(12)
Protein domain
:
automated matches
(12)
Coxiella burnetii [TaxId: 227377]
(3)
1a
d3slha_
A:
1b
d3slhb_
B:
1c
d3slhc_
C:
1d
d3slhd_
D:
[
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Chain B
Asymmetric Unit 1
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