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3SLH
Biol. Unit 1
Info
Asym.Unit (630 KB)
Biol.Unit 1 (164 KB)
Biol.Unit 2 (160 KB)
Biol.Unit 3 (159 KB)
Biol.Unit 4 (158 KB)
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(1)
Title
:
1.70 ANGSTROM RESOLUTION STRUCTURE OF 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE (AROA) FROM COXIELLA BURNETII IN COMPLEX WITH SHIKIMATE-3-PHOSPHATE AND GLYPHOSATE
Authors
:
S. H. Light, G. Minasov, E. V. Filippova, S. N. Krishna, L. Shuvalova, L. W. F. Anderson, Center For Structural Genomics Of Infectious D (Csgid)
Date
:
24 Jun 11 (Deposition) - 20 Jul 11 (Release) - 20 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, 3-Phosphoshikimate 1-Carboxyvinyltransferase Activity, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. H. Light, G. Minasov, E. V. Filippova, S. N. Krishna, L. Shuvalova, L. Papazisi, W. F. Anderson, Center For Structural Genomics Of Infectious Diseases (Csgid)
1. 70 Angstrom Resolution Structure Of 3-Phosphoshikimate 1-Carboxyvinyltransferase(Aroa) From Coxiella Burnetii In Complex With Shikimate-3-Phosphate And Glyphosate
To Be Published
[
close entry info
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Hetero Components
(7, 15)
Info
All Hetero Components
1a: PENTAETHYLENE GLYCOL (1PEa)
2a: BETA-MERCAPTOETHANOL (BMEa)
2b: BETA-MERCAPTOETHANOL (BMEb)
2c: BETA-MERCAPTOETHANOL (BMEc)
2d: BETA-MERCAPTOETHANOL (BMEd)
2e: BETA-MERCAPTOETHANOL (BMEe)
3a: CHLORIDE ION (CLa)
3b: CHLORIDE ION (CLb)
4a: 1,2-ETHANEDIOL (EDOa)
4b: 1,2-ETHANEDIOL (EDOb)
4c: 1,2-ETHANEDIOL (EDOc)
4d: 1,2-ETHANEDIOL (EDOd)
5a: GLYPHOSATE (GPJa)
5b: GLYPHOSATE (GPJb)
5c: GLYPHOSATE (GPJc)
5d: GLYPHOSATE (GPJd)
5e: GLYPHOSATE (GPJe)
6a: DI(HYDROXYETHYL)ETHER (PEGa)
6b: DI(HYDROXYETHYL)ETHER (PEGb)
6c: DI(HYDROXYETHYL)ETHER (PEGc)
6d: DI(HYDROXYETHYL)ETHER (PEGd)
6e: DI(HYDROXYETHYL)ETHER (PEGe)
6f: DI(HYDROXYETHYL)ETHER (PEGf)
6g: DI(HYDROXYETHYL)ETHER (PEGg)
6h: DI(HYDROXYETHYL)ETHER (PEGh)
6i: DI(HYDROXYETHYL)ETHER (PEGi)
6j: DI(HYDROXYETHYL)ETHER (PEGj)
6k: DI(HYDROXYETHYL)ETHER (PEGk)
6l: DI(HYDROXYETHYL)ETHER (PEGl)
6m: DI(HYDROXYETHYL)ETHER (PEGm)
6n: DI(HYDROXYETHYL)ETHER (PEGn)
7a: TETRAETHYLENE GLYCOL (PG4a)
7b: TETRAETHYLENE GLYCOL (PG4b)
7c: TETRAETHYLENE GLYCOL (PG4c)
8a: TRIETHYLENE GLYCOL (PGEa)
9a: PHOSPHATE ION (PO4a)
9b: PHOSPHATE ION (PO4b)
9c: PHOSPHATE ION (PO4c)
9d: PHOSPHATE ION (PO4d)
10a: SHIKIMATE-3-PHOSPHATE (S3Pa)
10b: SHIKIMATE-3-PHOSPHATE (S3Pb)
10c: SHIKIMATE-3-PHOSPHATE (S3Pc)
10d: SHIKIMATE-3-PHOSPHATE (S3Pd)
11a: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHE... (SKMa)
11b: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHE... (SKMb)
11c: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHE... (SKMc)
11d: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHE... (SKMd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
1PE
-1
Ligand/Ion
PENTAETHYLENE GLYCOL
2
BME
2
Ligand/Ion
BETA-MERCAPTOETHANOL
3
CL
-1
Ligand/Ion
CHLORIDE ION
4
EDO
2
Ligand/Ion
1,2-ETHANEDIOL
5
GPJ
1
Ligand/Ion
GLYPHOSATE
6
PEG
6
Ligand/Ion
DI(HYDROXYETHYL)ETHER
7
PG4
-1
Ligand/Ion
TETRAETHYLENE GLYCOL
8
PGE
-1
Ligand/Ion
TRIETHYLENE GLYCOL
9
PO4
2
Ligand/Ion
PHOSPHATE ION
10
S3P
1
Ligand/Ion
SHIKIMATE-3-PHOSPHATE
11
SKM
1
Ligand/Ion
(3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLICACID
[
close Hetero Component info
]
Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: CC3 (SOFTWARE)
17: EC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:253 , CYS A:255 , ASP A:292
BINDING SITE FOR RESIDUE BME A 439
02
AC2
SOFTWARE
GLU A:14 , CYS A:16
BINDING SITE FOR RESIDUE BME A 440
03
AC3
SOFTWARE
ARG A:127 , SER A:167 , ALA A:168 , GLN A:169 , GLU A:338 , LYS A:342 , SKM A:445 , HOH A:493 , HOH A:511 , HOH A:544 , HOH A:575 , HOH A:1219
BINDING SITE FOR RESIDUE PO4 A 441
04
AC4
SOFTWARE
ASP A:117 , SER A:118 , HIS A:281 , HOH A:607 , HOH A:912 , HOH A:1490
BINDING SITE FOR RESIDUE PO4 A 442
05
AC5
SOFTWARE
LYS A:21 , SER A:22 , ARG A:26 , THR A:96 , SER A:167 , ALA A:168 , GLN A:169 , ARG A:194 , ASP A:315 , LYS A:342 , GPJ A:444 , HOH A:493 , HOH A:511 , HOH A:544 , HOH A:575 , HOH A:1219
BINDING SITE FOR RESIDUE S3P A 443
06
AC6
SOFTWARE
LYS A:21 , ASN A:93 , GLY A:95 , THR A:96 , ARG A:99 , ARG A:123 , GLN A:169 , ASP A:315 , GLU A:343 , ARG A:346 , HIS A:386 , ARG A:387 , S3P A:443 , SKM A:445 , HOH A:485 , HOH A:575 , HOH A:593
BINDING SITE FOR RESIDUE GPJ A 444
07
AC7
SOFTWARE
LYS A:21 , SER A:22 , ARG A:26 , THR A:96 , ALA A:168 , GLN A:169 , ARG A:194 , ASP A:315 , LYS A:342 , PO4 A:441 , GPJ A:444
BINDING SITE FOR RESIDUE SKM A 445
08
AC8
SOFTWARE
LYS A:301 , GLY A:302 , GLY A:329 , LYS A:330
BINDING SITE FOR RESIDUE EDO A 446
09
AC9
SOFTWARE
TYR A:180 , GLY A:220 , HOH A:507 , HOH A:1387
BINDING SITE FOR RESIDUE PEG A 447
10
BC1
SOFTWARE
MET A:1 , GLY A:431
BINDING SITE FOR RESIDUE PEG A 448
11
BC2
SOFTWARE
ALA A:360 , GLU A:362
BINDING SITE FOR RESIDUE EDO A 449
12
BC3
SOFTWARE
MET A:273 , ARG A:299
BINDING SITE FOR RESIDUE PEG A 450
13
BC4
SOFTWARE
THR A:142 , PRO A:147 , GLU A:284
BINDING SITE FOR RESIDUE PEG A 451
14
BC5
SOFTWARE
THR A:344 , ALA A:348 , TYR A:383 , HOH A:813
BINDING SITE FOR RESIDUE PEG A 452
15
BC6
SOFTWARE
GLY A:36 , GLN A:37 , ALA A:225 , ASN A:226 , ASP A:227 , HOH A:1507
BINDING SITE FOR RESIDUE PEG A 453
16
CC3
SOFTWARE
ARG A:435 , GLY B:36 , GLN B:37 , ASN B:226 , ASP B:227
BINDING SITE FOR RESIDUE GPJ B 444
17
EC8
SOFTWARE
GLY A:143 , ASN A:144 , HOH A:1320 , SER D:8 , GLN D:9 , ASN D:428 , HOH D:476
BINDING SITE FOR RESIDUE PEG D 444
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: EPSP_SYNTHASE_1 (A:89-103)
2: EPSP_SYNTHASE_2 (A:340-358)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EPSP_SYNTHASE_1
PS00104
EPSP synthase signature 1.
AROA_COXBU
89-103
1
A:89-103
-
-
-
2
EPSP_SYNTHASE_2
PS00885
EPSP synthase signature 2.
AROA_COXBU
340-358
1
A:340-358
-
-
-
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3slha_ (A:)
1b: SCOP_d3slhb_ (B:)
1c: SCOP_d3slhc_ (C:)
1d: SCOP_d3slhd_ (D:)
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Protein Domains
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(
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Organisms
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(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
IF3-like
(127)
Superfamily
:
EPT/RTPC-like
(82)
Family
:
automated matches
(12)
Protein domain
:
automated matches
(12)
Coxiella burnetii [TaxId: 227377]
(3)
1a
d3slha_
A:
1b
d3slhb_
B:
1c
d3slhc_
C:
1d
d3slhd_
D:
[
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Asymmetric Unit 1
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