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3SH1
Biol. Unit 2
Info
Asym.Unit (390 KB)
Biol.Unit 1 (193 KB)
Biol.Unit 2 (190 KB)
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(1)
Title
:
AC-ACHBP LIGAND BINDING DOMAIN MUTATED TO HUMAN ALPHA-7 NACHR
Authors
:
A. Nemecz, P. W. Taylor
Date
:
15 Jun 11 (Deposition) - 26 Oct 11 (Release) - 17 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J
Biol. Unit 1: A,B,C,D,E (1x)
Biol. Unit 2: F,G,H,I,J (1x)
Keywords
:
Human Nicotinic Acetylcholine Receptor Binding Protein, Methyllycaconitine Binding, Glycosylation, Receptor
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Nemecz, P. Taylor
Creating An Alpha-7 Nicotinic Acetylcholine Recognition Domain From The Acetylcholine Binding Protein: Crystallographic And Ligand Selectivity Analyses
J. Biol. Chem. V. 286 42555 2011
[
close entry info
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Hetero Components
(6, 22)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
2a: BETA-D-MANNOSE (BMAa)
2b: BETA-D-MANNOSE (BMAb)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
3e: MAGNESIUM ION (MGe)
4a: METHYLLYCACONITINE (MLKa)
4b: METHYLLYCACONITINE (MLKb)
4c: METHYLLYCACONITINE (MLKc)
4d: METHYLLYCACONITINE (MLKd)
4e: METHYLLYCACONITINE (MLKe)
4f: METHYLLYCACONITINE (MLKf)
4g: METHYLLYCACONITINE (MLKg)
4h: METHYLLYCACONITINE (MLKh)
4i: METHYLLYCACONITINE (MLKi)
4j: METHYLLYCACONITINE (MLKj)
5a: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDa)
5b: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDb)
5c: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDc)
5d: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDd)
5e: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDe)
5f: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDf)
5g: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDg)
6a: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDa)
6b: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDb)
6c: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDc)
6d: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDd)
6e: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDe)
7a: N-ACETYL-D-GLUCOSAMINE (NAGa)
7b: N-ACETYL-D-GLUCOSAMINE (NAGb)
7c: N-ACETYL-D-GLUCOSAMINE (NAGc)
7d: N-ACETYL-D-GLUCOSAMINE (NAGd)
7e: N-ACETYL-D-GLUCOSAMINE (NAGe)
7f: N-ACETYL-D-GLUCOSAMINE (NAGf)
7g: N-ACETYL-D-GLUCOSAMINE (NAGg)
7h: N-ACETYL-D-GLUCOSAMINE (NAGh)
7i: N-ACETYL-D-GLUCOSAMINE (NAGi)
7j: N-ACETYL-D-GLUCOSAMINE (NAGj)
7k: N-ACETYL-D-GLUCOSAMINE (NAGk)
7l: N-ACETYL-D-GLUCOSAMINE (NAGl)
7m: N-ACETYL-D-GLUCOSAMINE (NAGm)
7n: N-ACETYL-D-GLUCOSAMINE (NAGn)
7o: N-ACETYL-D-GLUCOSAMINE (NAGo)
7p: N-ACETYL-D-GLUCOSAMINE (NAGp)
7q: N-ACETYL-D-GLUCOSAMINE (NAGq)
7r: N-ACETYL-D-GLUCOSAMINE (NAGr)
7s: N-ACETYL-D-GLUCOSAMINE (NAGs)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
BMA
2
Ligand/Ion
BETA-D-MANNOSE
3
MG
-1
Ligand/Ion
MAGNESIUM ION
4
MLK
5
Ligand/Ion
METHYLLYCACONITINE
5
MPD
4
Ligand/Ion
(4S)-2-METHYL-2,4-PENTANEDIOL
6
MRD
1
Ligand/Ion
(4R)-2-METHYLPENTANE-2,4-DIOL
7
NAG
9
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
[
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]
Sites
(26, 26)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC8 (SOFTWARE)
03: BC4 (SOFTWARE)
04: CC3 (SOFTWARE)
05: CC9 (SOFTWARE)
06: DC1 (SOFTWARE)
07: DC2 (SOFTWARE)
08: DC3 (SOFTWARE)
09: DC4 (SOFTWARE)
10: DC5 (SOFTWARE)
11: DC6 (SOFTWARE)
12: DC7 (SOFTWARE)
13: DC8 (SOFTWARE)
14: DC9 (SOFTWARE)
15: EC1 (SOFTWARE)
16: EC2 (SOFTWARE)
17: EC3 (SOFTWARE)
18: EC4 (SOFTWARE)
19: EC5 (SOFTWARE)
20: EC6 (SOFTWARE)
21: EC7 (SOFTWARE)
22: EC8 (SOFTWARE)
23: EC9 (SOFTWARE)
24: FC1 (SOFTWARE)
25: FC2 (SOFTWARE)
26: FC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:-3 , HIS A:1 , ASP G:-3 , HIS G:1
BINDING SITE FOR RESIDUE MG A 222
02
AC8
SOFTWARE
ASP B:-3 , HIS B:1 , ASP F:-3 , HIS F:1
BINDING SITE FOR RESIDUE MG B 222
03
BC4
SOFTWARE
ASP C:-3 , HIS C:1 , ASP J:-3 , HIS J:1
BINDING SITE FOR RESIDUE MG C 222
04
CC3
SOFTWARE
ASP E:-3 , HIS E:1 , ASP H:-3 , HIS H:1
BINDING SITE FOR RESIDUE MG E 222
05
CC9
SOFTWARE
TRP F:86 , TYR F:149 , SER J:81
BINDING SITE FOR RESIDUE MRD F 305
06
DC1
SOFTWARE
ASN F:110 , SER F:111 , SER F:112 , HIS F:114
BINDING SITE FOR RESIDUE NAG F 250
07
DC2
SOFTWARE
TYR F:93 , LYS F:143 , TRP F:147 , TYR F:149 , ARG F:186 , TYR F:188 , TYR F:195 , ASP F:197 , TRP J:55 , GLN J:116 , LEU J:118 , SER J:167
BINDING SITE FOR RESIDUE MLK F 301
08
DC3
SOFTWARE
THR G:76 , ASN G:110 , HIS G:114 , NAG G:251
BINDING SITE FOR RESIDUE NAG G 250
09
DC4
SOFTWARE
HIS G:114 , NAG G:250
BINDING SITE FOR RESIDUE NAG G 251
10
DC5
SOFTWARE
TRP F:55 , GLN F:116 , LEU F:118 , SER F:167 , TYR G:93 , LYS G:143 , SER G:146 , TRP G:147 , TYR G:149 , ARG G:186 , TYR G:195 , ASP G:197
BINDING SITE FOR RESIDUE MLK G 301
11
DC6
SOFTWARE
ASN F:106 , TRP G:86 , TYR G:149
BINDING SITE FOR RESIDUE MPD G 305
12
DC7
SOFTWARE
ASN G:106 , TRP H:86 , TYR H:149
BINDING SITE FOR RESIDUE MPD G 222
13
DC8
SOFTWARE
ASN H:110 , SER H:112 , HIS H:114 , NAG H:251
BINDING SITE FOR RESIDUE NAG H 250
14
DC9
SOFTWARE
NAG H:250 , BMA H:252
BINDING SITE FOR RESIDUE NAG H 251
15
EC1
SOFTWARE
NAG H:251 , HOH H:338
BINDING SITE FOR RESIDUE BMA H 252
16
EC2
SOFTWARE
TRP G:55 , GLN G:116 , LEU G:118 , SER G:167 , TYR H:93 , LYS H:143 , SER H:146 , TRP H:147 , TYR H:149 , ARG H:186 , TYR H:195 , ASP H:197
BINDING SITE FOR RESIDUE MLK H 301
17
EC3
SOFTWARE
ASP D:-3 , HIS D:1 , ASP I:-3 , HIS I:1
BINDING SITE FOR RESIDUE MG I 222
18
EC4
SOFTWARE
ASN I:110 , SER I:112 , HIS I:114 , HOH I:335
BINDING SITE FOR RESIDUE NAG I 250
19
EC5
SOFTWARE
ASN I:74
BINDING SITE FOR RESIDUE NAG I 275
20
EC6
SOFTWARE
TRP H:55 , GLN H:116 , LEU H:118 , SER H:167 , TYR I:93 , SER I:94 , LYS I:143 , SER I:146 , TRP I:147 , TYR I:149 , TYR I:188 , CYS I:190 , TYR I:195
BINDING SITE FOR RESIDUE MLK I 301
21
EC7
SOFTWARE
ARG I:79 , PRO J:21 , TRP J:86 , TYR J:149
BINDING SITE FOR RESIDUE MPD J 305
22
EC8
SOFTWARE
LYS H:10 , SER H:81 , ASN H:106 , TRP I:86 , TYR I:149
BINDING SITE FOR RESIDUE MPD I 305
23
EC9
SOFTWARE
THR J:76 , ASN J:110 , SER J:111 , SER J:112 , HIS J:114 , NAG J:251
BINDING SITE FOR RESIDUE NAG J 250
24
FC1
SOFTWARE
NAG J:250 , BMA J:252
BINDING SITE FOR RESIDUE NAG J 251
25
FC2
SOFTWARE
NAG J:251
BINDING SITE FOR RESIDUE BMA J 252
26
FC3
SOFTWARE
TRP I:55 , SER I:167 , TYR J:93 , LYS J:143 , SER J:146 , TRP J:147 , TYR J:149 , ARG J:186 , TYR J:188 , TYR J:195 , ASP J:197
BINDING SITE FOR RESIDUE MLK J 301
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 10)
Info
All SCOP Domains
1a: SCOP_d3sh1a_ (A:)
1b: SCOP_d3sh1b_ (B:)
1c: SCOP_d3sh1c_ (C:)
1d: SCOP_d3sh1d_ (D:)
1e: SCOP_d3sh1e_ (E:)
1f: SCOP_d3sh1f_ (F:)
1g: SCOP_d3sh1g_ (G:)
1h: SCOP_d3sh1h_ (H:)
1i: SCOP_d3sh1i_ (I:)
1j: SCOP_d3sh1j_ (J:)
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Protein Domains
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(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Nicotinic receptor ligand binding domain-like
(58)
Superfamily
:
Nicotinic receptor ligand binding domain-like
(58)
Family
:
automated matches
(40)
Protein domain
:
automated matches
(40)
California sea hare (Aplysia californica) [TaxId: 6500]
(36)
1a
d3sh1a_
A:
1b
d3sh1b_
B:
1c
d3sh1c_
C:
1d
d3sh1d_
D:
1e
d3sh1e_
E:
1f
d3sh1f_
F:
1g
d3sh1g_
G:
1h
d3sh1h_
H:
1i
d3sh1i_
I:
1j
d3sh1j_
J:
[
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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