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Getting 'Exon' information from database.
3SEA
Asym. Unit
Info
Asym.Unit (69 KB)
Biol.Unit 1 (33 KB)
Biol.Unit 2 (33 KB)
Biol.Unit 3 (126 KB)
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(1)
Title
:
STRUCTURE OF RHEB-Y35A MUTANT IN GDP- AND GMPPNP-BOUND FORMS
Authors
:
M. T. Mazhab-Jafari, C. B. Marshall, N. Ishiyama, S. Vuk, M. Ikura
Date
:
10 Jun 11 (Deposition) - 20 Jun 12 (Release) - 26 Sep 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (2x)
Keywords
:
Globular, Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
M. T. Mazhab-Jafari, C. B. Marshall, N. Ishiyama, J. Ho, V. Di Palma, V. Stambolic, M. Ikura
An Autoinhibited Noncanonical Mechanism Of Gtp Hydrolysis B Rheb Maintains Mtorc1 Homeostasis.
Structure V. 20 1528 2012
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Hetero Components
(4, 5)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
2a: GUANOSINE-5'-DIPHOSPHATE (GDPa)
3a: PHOSPHOAMINOPHOSPHONIC ACID-GUANYL... (GNPa)
4a: MAGNESIUM ION (MGa)
4b: MAGNESIUM ION (MGb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
GDP
1
Ligand/Ion
GUANOSINE-5'-DIPHOSPHATE
3
GNP
1
Ligand/Ion
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
4
MG
2
Ligand/Ion
MAGNESIUM ION
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
SER A:20 , HOH A:170 , HOH A:172 , HOH A:176 , HOH A:197 , GDP A:201
BINDING SITE FOR RESIDUE MG A 202
2
AC2
SOFTWARE
SER A:16 , VAL A:17 , GLY A:18 , LYS A:19 , SER A:20 , SER A:21 , PHE A:31 , VAL A:32 , ASP A:33 , ASN A:119 , LYS A:120 , ASP A:122 , LEU A:123 , SER A:149 , ALA A:150 , HOH A:172 , HOH A:189 , HOH A:197 , MG A:202 , HOH A:235 , HOH A:269 , HOH A:273 , HOH A:290
BINDING SITE FOR RESIDUE GDP A 201
3
AC3
SOFTWARE
SER B:20 , THR B:38 , HOH B:174 , GNP B:179 , HOH B:262
BINDING SITE FOR RESIDUE MG B 178
4
AC4
SOFTWARE
ARG B:15 , SER B:16 , VAL B:17 , GLY B:18 , LYS B:19 , SER B:20 , SER B:21 , PHE B:31 , VAL B:32 , ASP B:33 , ALA B:35 , PRO B:37 , THR B:38 , GLY B:63 , ASN B:119 , LYS B:120 , ASP B:122 , LEU B:123 , SER B:149 , ALA B:150 , HOH B:174 , MG B:178 , HOH B:215 , HOH B:262 , HOH B:289
BINDING SITE FOR RESIDUE GNP B 179
5
AC5
SOFTWARE
ALA B:35 , ASP B:36 , THR B:38 , ASN B:41 , HOH B:267
BINDING SITE FOR RESIDUE ACT B 1
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SAPs(SNPs)/Variants
(1, 2)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_036310 (E139K, chain A/B, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_036310
E
139
K
RHEB_HUMAN
Unclassified
---
A/B
E
139
K
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
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Exons
(8, 16)
Info
All Exons
Exon 1.1b (A:3-18 | B:3-18)
Exon 1.5 (A:18-42 | B:18-42)
Exon 1.6 (A:42-64 | B:42-64)
Exon 1.7 (A:65-92 | B:65-92)
Exon 1.8c (A:92-111 | B:92-111)
Exon 1.8f (A:111-127 | B:111-127)
Exon 1.9a (A:127-154 | B:127-154)
Exon 1.10d (A:155-169 | B:155-169)
View:
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All Exon Boundaries
1: Boundary -/1.1b
2: Boundary 1.1b/1.5
3: Boundary 1.5/1.6
4: Boundary 1.6/1.7
5: Boundary 1.7/1.8c
6: Boundary 1.8c/1.8f
7: Boundary 1.8f/1.9a
8: Boundary 1.9a/1.10d
9: Boundary 1.10d/-
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000262187
1b
ENSE00001200523
chr7:
151217010-151216546
465
RHEB_HUMAN
1-18
18
2
A:3-18
B:3-18
16
16
1.5
ENST00000262187
5
ENSE00000730260
chr7:
151188100-151188029
72
RHEB_HUMAN
18-42
25
2
A:18-42
B:18-42
25
25
1.6
ENST00000262187
6
ENSE00000909920
chr7:
151181890-151181823
68
RHEB_HUMAN
42-64
23
2
A:42-64
B:42-64
23
23
1.7
ENST00000262187
7
ENSE00000730253
chr7:
151174501-151174419
83
RHEB_HUMAN
65-92
28
2
A:65-92
B:65-92
28
28
1.8c
ENST00000262187
8c
ENSE00001139595
chr7:
151168691-151168635
57
RHEB_HUMAN
92-111
20
2
A:92-111
B:92-111
20
20
1.8f
ENST00000262187
8f
ENSE00001200505
chr7:
151168527-151168480
48
RHEB_HUMAN
111-127
17
2
A:111-127
B:111-127
17
17
1.9a
ENST00000262187
9a
ENSE00001315618
chr7:
151167738-151167657
82
RHEB_HUMAN
127-154
28
2
A:127-154
B:127-154
28
28
1.10d
ENST00000262187
10d
ENSE00001321653
chr7:
151164297-151163098
1200
RHEB_HUMAN
155-184
30
2
A:155-169
B:155-169
15
15
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3seaa_ (A:)
1b: SCOP_d3seab_ (B:)
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Protein Domains
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Organisms
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)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
G proteins
(693)
Protein domain
:
GTP-binding protein RheB
(4)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d3seaa_
A:
1b
d3seab_
B:
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
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Asym.Unit (69 KB)
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