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3SDS
Biol. Unit 1
Info
Asym.Unit (297 KB)
Biol.Unit 1 (292 KB)
Biol.Unit 2 (291 KB)
Biol.Unit 3 (290 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A MITOCHONDRIAL ORNITHINE CARBAMOYLTRANSFERASE FROM COCCIDIOIDES IMMITIS
Authors
:
T. E. Edwards, J. Abendroth, Seattle Structural Genomics Center F Infectious Disease (Ssgcid)
Date
:
09 Jun 11 (Deposition) - 22 Jun 11 (Release) - 21 Sep 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (3x)
Biol. Unit 2: B (3x)
Biol. Unit 3: C (3x)
Keywords
:
Structural Genomics, Seattle Structural Genomics Center For Infectious Disease, Ssgcid, Valley Fever, Coccidioidomycosis, Otcase, Mitochondrial, Pathogenic Fungus, Dust-Borne Pathogen, Carbamoyl Phosphate, L-Ornithine, L-Citrulline, Amino Acid Biosynthesis, Transferase
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Reference
:
S. N. Hewitt, R. Choi, A. Kelley, G. J. Crowther, A. J. Napuli, W. C. Van Voorhis
Expression Of Proteins In Escherichia Coli As Fusions With Maltose-Binding Protein To Rescue Non-Expressed Targets In High-Throughput Protein-Expression And Purification Pipeline.
Acta Crystallogr. , Sect. F V. 67 1006 2011
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Hetero Components
(0, 0)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
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Sites
(2, 2)
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1: AC2 (SOFTWARE)
2: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
LYS A:71 , ARG A:72 , LYS A:96
BINDING SITE FOR RESIDUE CL A 350
2
AC4
SOFTWARE
HIS A:90
BINDING SITE FOR RESIDUE CL A 351
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 3)
Info
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1: CARBAMOYLTRANSFERASE (A:69-76)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CARBAMOYLTRANSFERASE
PS00097
Aspartate and ornithine carbamoyltransferases signature.
OTC_COCIM
69-76
3
A:69-76
-
-
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Exons
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SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d3sdsa1 (A:18-167)
1b: SCOP_d3sdsa2 (A:182-349)
1c: SCOP_d3sdsb1 (B:17-167)
1d: SCOP_d3sdsb2 (B:182-349)
1e: SCOP_d3sdsc1 (C:18-167)
1f: SCOP_d3sdsc2 (C:182-349)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
ATC-like
(129)
Superfamily
:
Aspartate/ornithine carbamoyltransferase
(122)
Family
:
automated matches
(35)
Protein domain
:
automated matches
(35)
Coccidioides immitis [TaxId: 246410]
(1)
1a
d3sdsa1
A:18-167
1b
d3sdsa2
A:182-349
1c
d3sdsb1
B:17-167
1d
d3sdsb2
B:182-349
1e
d3sdsc1
C:18-167
1f
d3sdsc2
C:182-349
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CATH Domains
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Pfam Domains
(2, 6)
Info
all PFAM domains
1a: PFAM_OTCace_3sdsC01 (C:183-341)
1b: PFAM_OTCace_3sdsC02 (C:183-341)
1c: PFAM_OTCace_3sdsC03 (C:183-341)
2a: PFAM_OTCace_N_3sdsC04 (C:20-165)
2b: PFAM_OTCace_N_3sdsC05 (C:20-165)
2c: PFAM_OTCace_N_3sdsC06 (C:20-165)
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Clan
:
no clan defined [family: OTCace]
(48)
Family
:
OTCace
(48)
Coccidioides immitis (strain RS) (Valley fever fungus)
(1)
1a
OTCace-3sdsC01
C:183-341
1b
OTCace-3sdsC02
C:183-341
1c
OTCace-3sdsC03
C:183-341
Clan
:
no clan defined [family: OTCace_N]
(48)
Family
:
OTCace_N
(48)
Coccidioides immitis (strain RS) (Valley fever fungus)
(1)
2a
OTCace_N-3sdsC04
C:20-165
2b
OTCace_N-3sdsC05
C:20-165
2c
OTCace_N-3sdsC06
C:20-165
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Show PDB file:
Asym.Unit (297 KB)
Header - Asym.Unit
Biol.Unit 1 (292 KB)
Header - Biol.Unit 1
Biol.Unit 2 (291 KB)
Header - Biol.Unit 2
Biol.Unit 3 (290 KB)
Header - Biol.Unit 3
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