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Asym. Unit
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Asym.Unit (89 KB)
Biol.Unit 1 (28 KB)
Biol.Unit 2 (28 KB)
Biol.Unit 3 (32 KB)
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(1)
Title
:
D2 DOMAIN OF HUMAN IFNAR2
Authors
:
C. Thomas, K. C. Garcia
Date
:
31 May 11 (Deposition) - 31 Aug 11 (Release) - 21 Mar 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Keywords
:
Human, Type I Interferons, Receptor Chain, Ifnar2, Fibronectin Type Iii Module, Part Of Type I Interferon Receptor Chain, Interferon, Extracellular Space, Signaling Protein Receptor
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Thomas, I. Moraga, D. Levin, P. O. Krutzik, Y. Podoplelova, A. Trejo C. Lee, G. Yarden, S. E. Vleck, J. S. Glenn, G. P. Nolan, J. Piehler, G. Schreiber, K. C. Garcia
Structural Linkage Between Ligand Discrimination And Receptor Activation By Type I Interferons.
Cell(Cambridge, Mass. ) V. 146 621 2011
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Hetero Components
(2, 6)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
2a: SELENOMETHIONINE (MSEa)
2b: SELENOMETHIONINE (MSEb)
2c: SELENOMETHIONINE (MSEc)
2d: SELENOMETHIONINE (MSEd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
2
Ligand/Ion
CHLORIDE ION
2
MSE
4
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LYS A:172
BINDING SITE FOR RESIDUE CL A 1
2
AC2
SOFTWARE
THR A:167
BINDING SITE FOR RESIDUE CL C 1
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SAPs(SNPs)/Variants
(1, 3)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_020523 (I169V, chain A/B/C, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_020523
I
196
V
INAR2_HUMAN
Polymorphism
17860223
A/B/C
I
169
V
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
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Exons
(2, 6)
Info
All Exons
Exon 1.8a (A:106-153 (gaps) | B:107-153 (gaps...)
Exon 1.10 (A:154-205 (gaps) | B:154-205 (gaps...)
View:
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All Exon Boundaries
1: Boundary 1.7b/1.8a
2: Boundary 1.8a/1.10
3: Boundary 1.10/1.11
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1d
ENST00000342136
1d
ENSE00001384199
chr21:
34602279-34602521
243
INAR2_HUMAN
-
0
0
-
-
1.3a
ENST00000342136
3a
ENSE00001366893
chr21:
34614145-34614282
138
INAR2_HUMAN
1-19
19
0
-
-
1.4
ENST00000342136
4
ENSE00001043262
chr21:
34615978-34616019
42
INAR2_HUMAN
19-33
15
0
-
-
1.5
ENST00000342136
5
ENSE00001784597
chr21:
34617256-34617379
124
INAR2_HUMAN
33-74
42
0
-
-
1.7b
ENST00000342136
7b
ENSE00001733110
chr21:
34619023-34619195
173
INAR2_HUMAN
74-132
59
0
-
-
1.8a
ENST00000342136
8a
ENSE00002144798
chr21:
34621014-34621159
146
INAR2_HUMAN
132-180
49
3
A:106-153 (gaps)
B:107-153 (gaps)
C:106-153 (gaps)
48
47
48
1.10
ENST00000342136
10
ENSE00002186976
chr21:
34624967-34625135
169
INAR2_HUMAN
181-237
57
3
A:154-205 (gaps)
B:154-205 (gaps)
C:154-205
52
52
52
1.11
ENST00000342136
11
ENSE00001781920
chr21:
34632902-34633032
131
INAR2_HUMAN
237-280
44
0
-
-
1.12g
ENST00000342136
12g
ENSE00001764722
chr21:
34635098-34636830
1733
INAR2_HUMAN
281-515
235
0
-
-
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SCOP Domains
(0, 0)
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All SCOP Domains
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Asym.Unit (89 KB)
Header - Asym.Unit
Biol.Unit 1 (28 KB)
Header - Biol.Unit 1
Biol.Unit 2 (28 KB)
Header - Biol.Unit 2
Biol.Unit 3 (32 KB)
Header - Biol.Unit 3
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