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Getting 'Exon' information from database.
3S68
Asym. Unit
Info
Asym.Unit (119 KB)
Biol.Unit 1 (113 KB)
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(1)
Title
:
RAT COMT IN COMPLEX WITH SAM AND TOLCAPONE AT 1.85A, P3221, RFREE=22.0
Authors
:
A. Ehler, D. Schlatter, M. Stihle, J. Benz, M. G. Rudolph
Date
:
25 May 11 (Deposition) - 01 Feb 12 (Release) - 23 May 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.85
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Methyltransferase, Neurotransmitter Degradation, Transferase- Transferase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Ellermann, C. Lerner, G. Burgy, A. Ehler, C. Bissantz, R. Jakob-Roetne, R. Paulini, O. Allemann, H. Tissot, D. Grunstein, M. Stihle, F. Diederich, M. G. Rudolph
Catechol-O-Methyltransferase In Complex With Substituted 3'-Deoxyribose Bisubstrate Inhibitors
Acta Crystallogr. , Sect. D V. 68 253 2012
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Hetero Components
(5, 7)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
2a: MAGNESIUM ION (MGa)
3a: S-ADENOSYLMETHIONINE (SAMa)
4a: SULFATE ION (SO4a)
5a: TOLCAPONE (TCWa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
3
Ligand/Ion
CHLORIDE ION
2
MG
1
Ligand/Ion
MAGNESIUM ION
3
SAM
1
Ligand/Ion
S-ADENOSYLMETHIONINE
4
SO4
1
Ligand/Ion
SULFATE ION
5
TCW
1
Ligand/Ion
TOLCAPONE
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:141 , ASP A:169 , ASN A:170 , TCW A:227 , HOH A:229
BINDING SITE FOR RESIDUE MG A 222
2
AC2
SOFTWARE
ASP A:3 , THR A:4 , LYS A:5 , ARG A:8 , HOH A:381
BINDING SITE FOR RESIDUE SO4 A 223
3
AC3
SOFTWARE
ASP A:44 , ALA A:45 , TYR A:200 , HOH A:299 , HOH A:300
BINDING SITE FOR RESIDUE CL A 224
4
AC4
SOFTWARE
ARG A:146 , THR A:192 , HIS A:193 , HOH A:394
BINDING SITE FOR RESIDUE CL A 225
5
AC5
SOFTWARE
LYS A:202
BINDING SITE FOR RESIDUE CL A 226
6
AC6
SOFTWARE
TRP A:38 , ASP A:141 , HIS A:142 , TRP A:143 , LYS A:144 , ASP A:169 , ASN A:170 , LEU A:198 , GLU A:199 , MG A:222 , SAM A:228 , HOH A:229
BINDING SITE FOR RESIDUE TCW A 227
7
AC7
SOFTWARE
MET A:40 , ASN A:41 , VAL A:42 , GLU A:64 , GLY A:66 , ALA A:67 , TYR A:68 , TYR A:71 , SER A:72 , GLU A:90 , MET A:91 , TYR A:95 , GLY A:117 , ALA A:118 , SER A:119 , GLN A:120 , ASP A:141 , HIS A:142 , TRP A:143 , TCW A:227 , HOH A:230 , HOH A:257 , HOH A:284
BINDING SITE FOR RESIDUE SAM A 228
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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Sorry, no Info available
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Exons
(4, 4)
Info
All Exons
Exon 1.2 (A:3-47)
Exon 1.3 (A:47-111)
Exon 1.4 (A:112-155)
Exon 1.5 (A:156-215)
View:
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All Exon Boundaries
1: Boundary 1.1/1.2
2: Boundary 1.2/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5
5: Boundary 1.5/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSRNOT00000050269
1
ENSRNOE00000455167
chr11:
84561591-84561757
167
COMT_RAT
-
0
0
-
-
1.2
ENSRNOT00000050269
2
ENSRNOE00000018229
chr11:
84576767-84577034
268
COMT_RAT
1-90
90
1
A:3-47
45
1.3
ENSRNOT00000050269
3
ENSRNOE00000018230
chr11:
84577399-84577592
194
COMT_RAT
90-154
65
1
A:47-111
65
1.4
ENSRNOT00000050269
4
ENSRNOE00000018231
chr11:
84577902-84578033
132
COMT_RAT
155-198
44
1
A:112-155
44
1.5
ENSRNOT00000050269
5
ENSRNOE00000317236
chr11:
84580831-84581705
875
COMT_RAT
199-264
66
1
A:156-215
60
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3s68a_ (A:)
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)
(
)
Folds
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(
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(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
S-adenosyl-L-methionine-dependent methyltransferases
(533)
Superfamily
:
S-adenosyl-L-methionine-dependent methyltransferases
(533)
Family
:
COMT-like
(31)
Protein domain
:
automated matches
(25)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(20)
1a
d3s68a_
A:
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
(0, 0)
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all PFAM domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (119 KB)
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