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3S5T
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Biol.Unit 1 (179 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A MEMBER OF DUF3298 FAMILY (BF2082) FROM BACTEROIDES FRAGILIS NCTC 9343 AT 2.30 A RESOLUTION
Authors
:
Joint Center For Structural Genomics (Jcsg)
Date
:
23 May 11 (Deposition) - 29 Jun 11 (Release) - 16 Nov 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Peptidoglycan Deacetylase N-Terminal Noncatalytic Region, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-Biology, Unknown Function
(Keyword Search:
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Reference
:
Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of A Member Of Duf3298 Family (Bf2082) From Bacteroides Fragilis Nctc 9343 At 2. 30 A Resolution
To Be Published
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Hetero Components
(4, 16)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
2a: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDa)
2b: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDb)
2c: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDc)
3a: SELENOMETHIONINE (MSEa)
3b: SELENOMETHIONINE (MSEb)
3c: SELENOMETHIONINE (MSEc)
3d: SELENOMETHIONINE (MSEd)
3e: SELENOMETHIONINE (MSEe)
3f: SELENOMETHIONINE (MSEf)
3g: SELENOMETHIONINE (MSEg)
3h: SELENOMETHIONINE (MSEh)
3i: SELENOMETHIONINE (MSEi)
3j: SELENOMETHIONINE (MSEj)
4a: PHOSPHATE ION (PO4a)
4b: PHOSPHATE ION (PO4b)
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No.
Name
Count
Type
Full Name
1
CL
1
Ligand/Ion
CHLORIDE ION
2
MPD
3
Ligand/Ion
(4S)-2-METHYL-2,4-PENTANEDIOL
3
MSE
10
Mod. Amino Acid
SELENOMETHIONINE
4
PO4
2
Ligand/Ion
PHOSPHATE ION
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Sites
(6, 6)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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1
AC1
SOFTWARE
SER A:78 , TYR A:79 , GLU A:87
BINDING SITE FOR RESIDUE PO4 A 285
2
AC2
SOFTWARE
LYS A:73
BINDING SITE FOR RESIDUE PO4 A 286
3
AC3
SOFTWARE
GLU A:108 , TYR A:136 , MPD A:288 , HOH A:339
BINDING SITE FOR RESIDUE MPD A 287
4
AC4
SOFTWARE
ASP A:112 , LEU A:113 , TYR A:136 , HIS A:166 , TYR A:249 , MPD A:287
BINDING SITE FOR RESIDUE MPD A 288
5
AC5
SOFTWARE
PHE A:47 , GLY A:48 , ARG A:110 , GLU A:114 , GLU A:119 , ASN A:123
BINDING SITE FOR RESIDUE MPD A 289
6
AC6
SOFTWARE
HIS A:45 , ARG A:110
BINDING SITE FOR RESIDUE CL A 290
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SAPs(SNPs)/Variants
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_DUF3298_3s5tA01 (A:186-267)
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Clan
:
no clan defined [family: DUF3298]
(1)
Family
:
DUF3298
(1)
Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)
(1)
1a
DUF3298-3s5tA01
A:186-267
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