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3RVZ
Biol. Unit 1
Info
Asym.Unit (82 KB)
Biol.Unit 1 (149 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE NAVAB VOLTAGE-GATED SODIUM CHANNEL (ILE217CYS, 2.8 A)
Authors
:
J. Payandeh, T. Scheuer, N. Zheng, W. A. Catterall
Date
:
06 May 11 (Deposition) - 13 Jul 11 (Release) - 27 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (2x)
Keywords
:
Tetrameric Ion Channel, Voltage-Gated Sodium-Selective Ion Channel, Membrane, Metal Transport
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
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Reference
:
J. Payandeh, T. Scheuer, N. Zheng, W. A. Catterall
The Crystal Structure Of A Voltage-Gated Sodium Channel.
Nature V. 475 353 2011
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Hetero Components
(1, 28)
Info
All Hetero Components
1a: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSP... (PX4a)
1b: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSP... (PX4b)
1c: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSP... (PX4c)
1d: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSP... (PX4d)
1e: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSP... (PX4e)
1f: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSP... (PX4f)
1g: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSP... (PX4g)
1h: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSP... (PX4h)
1i: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSP... (PX4i)
1j: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSP... (PX4j)
1k: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSP... (PX4k)
1l: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSP... (PX4l)
1m: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSP... (PX4m)
1n: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSP... (PX4n)
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No.
Name
Count
Type
Full Name
1
PX4
28
Ligand/Ion
1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PX4 A:4004 , GLY B:2030 , LEU B:2031 , SER B:2034
BINDING SITE FOR RESIDUE PX4 A 4003
02
AC2
SOFTWARE
PX4 A:4003
BINDING SITE FOR RESIDUE PX4 A 4004
03
AC3
SOFTWARE
SER A:1132 , GLN B:2115
BINDING SITE FOR RESIDUE PX4 A 4005
04
AC4
SOFTWARE
TRP A:1076 , SER A:1121
BINDING SITE FOR RESIDUE PX4 A 4006
05
AC5
SOFTWARE
MET A:1174
BINDING SITE FOR RESIDUE PX4 A 4007
06
AC6
SOFTWARE
SER A:1034 , PX4 A:4014
BINDING SITE FOR RESIDUE PX4 A 4013
07
AC7
SOFTWARE
PX4 A:4013
BINDING SITE FOR RESIDUE PX4 A 4014
08
AC8
SOFTWARE
GLN A:1115 , MET A:1116 , SER B:2132
BINDING SITE FOR RESIDUE PX4 A 4015
09
AC9
SOFTWARE
MET A:1137 , TRP B:2195
BINDING SITE FOR RESIDUE PX4 B 4001
10
BC1
SOFTWARE
TYR B:2191
BINDING SITE FOR RESIDUE PX4 B 4002
11
BC2
SOFTWARE
TRP A:1195 , PHE A:1203 , MET B:2137
BINDING SITE FOR RESIDUE PX4 B 4011
12
BC3
SOFTWARE
TYR A:1191
BINDING SITE FOR RESIDUE PX4 B 4012
13
BC4
SOFTWARE
SER B:2121
BINDING SITE FOR RESIDUE PX4 B 4016
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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Pfam Domains
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Asym.Unit (82 KB)
Header - Asym.Unit
Biol.Unit 1 (149 KB)
Header - Biol.Unit 1
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