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3RVS
Asym. Unit
Info
Asym.Unit (55 KB)
Biol.Unit 1 (26 KB)
Biol.Unit 2 (26 KB)
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(1)
Title
:
STRUCTURE OF THE CHEYN59D/E89R TUNGSTATE COMPLEX
Authors
:
R. M. Immormino, C. A. Starbird, R. E. Silversmith, R. B. Bourret
Date
:
06 May 11 (Deposition) - 09 May 12 (Release) - 21 Sep 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Two-Component, Signal Transduction, Response Regulator, Chey, Beta- Alpha Protein, Chemotaxis, Chez, Chex, Chea, Phosphorylation, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. M. Immormino, C. A. Starbird, R. E. Silversmith, R. B. Bourret
Probing Mechanistic Similarities Between Response Regulator Signaling Proteins And Haloacid Dehalogenase Phosphatases.
Biochemistry V. 54 3514 2015
[
close entry info
]
Hetero Components
(4, 21)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
1g: GLYCEROL (GOLg)
1h: GLYCEROL (GOLh)
1i: GLYCEROL (GOLi)
2a: MANGANESE (II) ION (MNa)
2b: MANGANESE (II) ION (MNb)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
3g: SULFATE ION (SO4g)
3h: SULFATE ION (SO4h)
4a: TUNGSTATE(VI)ION (WO4a)
4b: TUNGSTATE(VI)ION (WO4b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOL
9
Ligand/Ion
GLYCEROL
2
MN
2
Ligand/Ion
MANGANESE (II) ION
3
SO4
8
Ligand/Ion
SULFATE ION
4
WO4
2
Ligand/Ion
TUNGSTATE(VI)ION
[
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Sites
(23, 23)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: DC1 (AUTHOR)
23: DC2 (AUTHOR)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:13 , ASP A:57 , ASP A:59 , WO4 A:131 , HOH A:152 , HOH A:189
BINDING SITE FOR RESIDUE MN A 130
02
AC2
SOFTWARE
ASP A:57 , TRP A:58 , ASP A:59 , THR A:87 , ALA A:88 , LYS A:109 , MN A:130 , HOH A:169 , HOH A:189
BINDING SITE FOR RESIDUE WO4 A 131
03
AC3
SOFTWARE
ASP A:13 , PHE A:14 , SER A:15 , HOH A:224 , HOH A:225 , HOH A:283
BINDING SITE FOR RESIDUE SO4 A 132
04
AC4
SOFTWARE
MET A:17 , ALA A:88 , LYS A:109 , HOH A:152 , HOH A:198 , HOH A:243
BINDING SITE FOR RESIDUE SO4 A 133
05
AC5
SOFTWARE
ARG A:89
BINDING SITE FOR RESIDUE SO4 A 134
06
AC6
SOFTWARE
HIS A:0 , GLY A:49 , GLY A:50
BINDING SITE FOR RESIDUE GOL A 135
07
AC7
SOFTWARE
ARG A:19 , LYS A:70 , HOH A:167 , HOH A:226 , LYS B:126 , HOH B:214
BINDING SITE FOR RESIDUE GOL A 136
08
AC8
SOFTWARE
LYS A:91 , LYS A:92 , GLU A:93
BINDING SITE FOR RESIDUE GOL A 137
09
AC9
SOFTWARE
ARG A:18 , GLU A:35 , GLU A:37 , HOH A:195
BINDING SITE FOR RESIDUE GOL A 138
10
BC1
SOFTWARE
LYS A:7 , ASN A:32 , HOH A:234 , HOH A:269 , HOH A:276
BINDING SITE FOR RESIDUE GOL A 139
11
BC2
SOFTWARE
ARG A:89 , ALA A:90 , LYS A:91 , ASN A:94
BINDING SITE FOR RESIDUE GOL A 140
12
BC3
SOFTWARE
ALA A:2 , LYS A:4 , LEU A:28 , GLY A:29 , PHE A:30
BINDING SITE FOR RESIDUE GOL A 141
13
BC4
SOFTWARE
ASP B:13 , ASP B:57 , ASP B:59 , WO4 B:131 , HOH B:141 , HOH B:184
BINDING SITE FOR RESIDUE MN B 130
14
BC5
SOFTWARE
ASP B:57 , TRP B:58 , ASP B:59 , THR B:87 , ALA B:88 , LYS B:109 , MN B:130 , HOH B:141 , HOH B:167 , HOH B:184
BINDING SITE FOR RESIDUE WO4 B 131
15
BC6
SOFTWARE
LYS A:92 , LYS B:91 , LYS B:92 , HOH B:144 , HOH B:211
BINDING SITE FOR RESIDUE SO4 B 132
16
BC7
SOFTWARE
ASP B:13 , PHE B:14 , SER B:15 , HOH B:145 , HOH B:180 , HOH B:227
BINDING SITE FOR RESIDUE SO4 B 133
17
BC8
SOFTWARE
LYS B:7 , ASN B:32 , HOH B:251 , HOH B:254
BINDING SITE FOR RESIDUE SO4 B 134
18
BC9
SOFTWARE
ARG B:89 , HOH B:191 , HOH B:209 , HOH B:284
BINDING SITE FOR RESIDUE SO4 B 135
19
CC1
SOFTWARE
MET B:17 , ALA B:88 , LYS B:109 , HOH B:141 , HOH B:201
BINDING SITE FOR RESIDUE SO4 B 136
20
CC2
SOFTWARE
ARG B:19 , LYS B:70 , HOH B:148 , HOH B:164
BINDING SITE FOR RESIDUE GOL B 137
21
CC3
SOFTWARE
ALA B:2 , LYS B:4 , LEU B:28 , GLY B:29 , PHE B:30 , HOH B:283
BINDING SITE FOR RESIDUE GOL B 138
22
DC1
AUTHOR
ASP A:13 , ASP A:57 , ASP A:59 , WO4 A:131 , HOH A:152 , HOH A:189
ACTIVE SITE FOR RESIDUE MN A 130
23
DC2
AUTHOR
ASP B:13 , ASP B:57 , ASP B:59 , WO4 B:131 , HOH B:141 , HOH B:184
ACTIVE SITE FOR RESIDUE MN B 130
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: RESPONSE_REGULATORY (A:7-124,B:7-124)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RESPONSE_REGULATORY
PS50110
Response regulatory domain profile.
CHEY_ECOLI
7-124
2
A:7-124
B:7-124
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3rvsa_ (A:)
1b: SCOP_d3rvsb_ (B:)
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Classes
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)
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Folds
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(
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Families
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Flavodoxin-like
(1057)
Superfamily
:
CheY-like
(258)
Family
:
CheY-related
(166)
Protein domain
:
automated matches
(29)
Escherichia coli K-12 [TaxId: 83333]
(17)
1a
d3rvsa_
A:
1b
d3rvsb_
B:
[
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Label:
Sorry, no Info available
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Atom Selection
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Protein
Nucleic
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Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Chain B
Asymmetric Unit 1
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Miscellaneous
Script
Example Commands
Example Command
Action
select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
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In this "Basic Interface" any change in the selection of a pulldown menu automatically triggers an action (one-step mechanism).
View and selection are coupled in the structure specific controls (e.g. "Hetero","PROSITE") .
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Show PDB file:
Asym.Unit (55 KB)
Header - Asym.Unit
Biol.Unit 1 (26 KB)
Header - Biol.Unit 1
Biol.Unit 2 (26 KB)
Header - Biol.Unit 2
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