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3RVJ
Biol. Unit 2
Info
Asym.Unit (54 KB)
Biol.Unit 1 (26 KB)
Biol.Unit 2 (25 KB)
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(1)
Title
:
STRUCTURE OF THE CHEY-BEF3 COMPLEX WITH SUBSTITUTIONS AT 59 AND 89: N59D AND E89Q
Authors
:
C. A. Starbird, R. M. Immormino, R. E. Silversmith, R. B. Bourret
Date
:
06 May 11 (Deposition) - 09 May 12 (Release) - 21 Sep 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Response Regulator, Two-Component, Signal Transduction, Chey, Beta- Alpha Protein, Chemotaxis, Chea Chex Chez, Phosphorylation, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. M. Immormino, C. A. Starbird, R. E. Silversmith, R. B. Bourret
Probing Mechanistic Similarities Between Response Regulator Signaling Proteins And Haloacid Dehalogenase Phosphatases.
Biochemistry V. 54 3514 2015
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Hetero Components
(3, 7)
Info
All Hetero Components
1a: BERYLLIUM TRIFLUORIDE ION (BEFa)
1b: BERYLLIUM TRIFLUORIDE ION (BEFb)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
2h: GLYCEROL (GOLh)
2i: GLYCEROL (GOLi)
2j: GLYCEROL (GOLj)
2k: GLYCEROL (GOLk)
2l: GLYCEROL (GOLl)
3a: MANGANESE (II) ION (MNa)
3b: MANGANESE (II) ION (MNb)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
View:
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Label:
No.
Name
Count
Type
Full Name
1
BEF
1
Ligand/Ion
BERYLLIUM TRIFLUORIDE ION
2
GOL
4
Ligand/Ion
GLYCEROL
3
MN
-1
Ligand/Ion
MANGANESE (II) ION
4
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(12, 12)
Info
All Sites
01: AC3 (SOFTWARE)
02: AC4 (SOFTWARE)
03: AC5 (SOFTWARE)
04: AC6 (SOFTWARE)
05: AC7 (SOFTWARE)
06: BC1 (SOFTWARE)
07: BC3 (SOFTWARE)
08: BC4 (SOFTWARE)
09: BC8 (SOFTWARE)
10: CC1 (SOFTWARE)
11: DC3 (AUTHOR)
12: DC4 (AUTHOR)
View:
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No.
Name
Evidence
Residues
Description
01
AC3
SOFTWARE
ASP B:13 , ASP B:57 , ASP B:59 , BEF B:131 , HOH B:197 , HOH B:198
BINDING SITE FOR RESIDUE MN B 130
02
AC4
SOFTWARE
ASP B:57 , TRP B:58 , ASP B:59 , THR B:87 , ALA B:88 , LYS B:109 , MN B:130 , HOH B:197 , HOH B:198
BINDING SITE FOR RESIDUE BEF B 131
03
AC5
SOFTWARE
LYS A:92 , HOH A:262 , HOH A:265 , LYS B:92
BINDING SITE FOR RESIDUE SO4 A 132
04
AC6
SOFTWARE
ASP B:13 , PHE B:14 , SER B:15 , HOH B:223
BINDING SITE FOR RESIDUE SO4 B 132
05
AC7
SOFTWARE
LYS B:7 , ASN B:32 , HOH B:258
BINDING SITE FOR RESIDUE SO4 B 133
06
BC1
SOFTWARE
ARG A:19 , LYS A:70 , HOH A:177 , HOH A:235 , LYS B:126
BINDING SITE FOR RESIDUE GOL A 135
07
BC3
SOFTWARE
ARG B:19 , HOH B:246 , HOH B:253 , HOH B:254
BINDING SITE FOR RESIDUE GOL B 134
08
BC4
SOFTWARE
HIS B:0 , GLY B:50 , HOH B:256
BINDING SITE FOR RESIDUE GOL B 135
09
BC8
SOFTWARE
ALA B:2 , LYS B:4 , LEU B:28 , GLY B:29 , HOH B:184
BINDING SITE FOR RESIDUE GOL B 136
10
CC1
SOFTWARE
TRP B:58 , HOH B:158 , HOH B:179 , HOH B:257
BINDING SITE FOR RESIDUE GOL B 137
11
DC3
AUTHOR
ASP B:13 , ASP B:57 , ASP B:59 , BEF B:131 , HOH B:197 , HOH B:198
ACTIVE SITE FOR RESIDUE MN B 130
12
DC4
AUTHOR
ASP B:57 , TRP B:58 , ASP B:59 , THR B:87 , ALA B:88 , LYS B:109 , MN B:130 , HOH B:197 , HOH B:198
ACTIVE SITE FOR RESIDUE BEF B 131
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: RESPONSE_REGULATORY (B:7-124)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RESPONSE_REGULATORY
PS50110
Response regulatory domain profile.
CHEY_ECOLI
7-124
1
-
B:7-124
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Exons
(0, 0)
Info
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3rvja_ (A:)
1b: SCOP_d3rvjb_ (B:)
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)
Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Flavodoxin-like
(1057)
Superfamily
:
CheY-like
(258)
Family
:
CheY-related
(166)
Protein domain
:
automated matches
(29)
Escherichia coli K-12 [TaxId: 83333]
(17)
1a
d3rvja_
A:
1b
d3rvjb_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Chain B
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (54 KB)
Header - Asym.Unit
Biol.Unit 1 (26 KB)
Header - Biol.Unit 1
Biol.Unit 2 (25 KB)
Header - Biol.Unit 2
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