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3RSH
Asym. Unit
Info
Asym.Unit (161 KB)
Biol.Unit 1 (303 KB)
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(1)
Title
:
STRUCTURE OF 3-KETOACYL-(ACYL-CARRIER-PROTEIN)REDUCTASE (FABG) FROM VIBRIO CHOLERAE O1 COMPLEXED WITH NADP+ (SPACE GROUP P62)
Authors
:
J. Hou, M. Chruszcz, D. R. Cooper, M. Grabowski, H. Zheng, T. Osinski, I. W. Anderson, W. Minor, Center For Structural Genomics Of Infect Diseases (Csgid)
Date
:
02 May 11 (Deposition) - 11 May 11 (Release) - 23 Mar 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (2x)
Keywords
:
Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Oxireductase, Fabg, Acyl Carrier Protein, Cell Plasma, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Hou, H. Zheng, M. Chruszcz, M. D. Zimmerman, I. A. Shumilin, T. Osinski, M. Demas, S. Grimshaw, W. Minor
Dissecting The Structural Elements For The Activation Of Beta-Ketoacyl-(Acyl Carrier Protein) Reductase From Vibrio Cholerae.
J. Bacteriol. V. 198 463 2015
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Hetero Components
(4, 23)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
2a: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPa)
2b: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPb)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
3g: SULFATE ION (SO4g)
3h: SULFATE ION (SO4h)
3i: SULFATE ION (SO4i)
3j: SULFATE ION (SO4j)
3k: SULFATE ION (SO4k)
4a: UNKNOWN ATOM OR ION (UNXa)
4b: UNKNOWN ATOM OR ION (UNXb)
4c: UNKNOWN ATOM OR ION (UNXc)
4d: UNKNOWN ATOM OR ION (UNXd)
4e: UNKNOWN ATOM OR ION (UNXe)
4f: UNKNOWN ATOM OR ION (UNXf)
4g: UNKNOWN ATOM OR ION (UNXg)
4h: UNKNOWN ATOM OR ION (UNXh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
2
Ligand/Ion
1,2-ETHANEDIOL
2
NAP
2
Ligand/Ion
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
3
SO4
11
Ligand/Ion
SULFATE ION
4
UNX
8
Ligand/Ion
UNKNOWN ATOM OR ION
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Sites
(15, 15)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:133 , ARG A:176
BINDING SITE FOR RESIDUE SO4 A 249
02
AC2
SOFTWARE
ARG A:19 , GLY A:20 , LYS A:23 , HOH A:277
BINDING SITE FOR RESIDUE SO4 A 250
03
AC3
SOFTWARE
LYS A:103 , GLU A:104 , LYS A:123
BINDING SITE FOR RESIDUE SO4 A 251
04
AC4
SOFTWARE
ILE A:93 , ARG A:95 , HOH A:321
BINDING SITE FOR RESIDUE SO4 A 252
05
AC5
SOFTWARE
GLY A:83 , LYS A:132
BINDING SITE FOR RESIDUE SO4 A 253
06
AC6
SOFTWARE
GLY A:16 , ALA A:17 , SER A:18 , ARG A:19 , ILE A:21 , THR A:41 , LEU A:62 , ASN A:63 , VAL A:64 , ASN A:90 , ALA A:91 , GLY A:92 , VAL A:140 , GLY A:141 , SER A:142 , TYR A:155 , LYS A:159 , PRO A:185 , GLY A:186 , ILE A:188 , THR A:190 , MET A:192 , THR A:193 , HOH A:298 , HOH A:306 , HOH A:309 , HOH A:320 , HOH A:322
BINDING SITE FOR RESIDUE NAP A 254
07
AC7
SOFTWARE
ILE A:248 , LYS B:167
BINDING SITE FOR RESIDUE EDO A 255
08
AC8
SOFTWARE
ARG B:19 , GLY B:20 , LYS B:23 , HOH B:278 , HOH B:297
BINDING SITE FOR RESIDUE SO4 B 249
09
AC9
SOFTWARE
LYS B:103 , GLU B:104
BINDING SITE FOR RESIDUE SO4 B 250
10
BC1
SOFTWARE
SER A:2 , ARG A:32 , MET B:1 , SER B:2 , ARG B:32
BINDING SITE FOR RESIDUE SO4 B 251
11
BC2
SOFTWARE
ILE B:93 , ARG B:95 , HOH B:269 , HOH B:309
BINDING SITE FOR RESIDUE SO4 B 252
12
BC3
SOFTWARE
ARG B:133 , ARG B:176
BINDING SITE FOR RESIDUE SO4 B 253
13
BC4
SOFTWARE
GLY B:83 , LYS B:132
BINDING SITE FOR RESIDUE SO4 B 254
14
BC5
SOFTWARE
GLY B:16 , SER B:18 , ARG B:19 , ILE B:21 , THR B:41 , LEU B:62 , ASN B:63 , VAL B:64 , ASN B:90 , ALA B:91 , ILE B:93 , VAL B:140 , GLY B:141 , TYR B:155 , LYS B:159 , PRO B:185 , GLY B:186 , ILE B:188 , THR B:190 , HOH B:286 , HOH B:288
BINDING SITE FOR RESIDUE NAP B 255
15
BC6
SOFTWARE
LYS A:167 , ILE B:248
BINDING SITE FOR RESIDUE EDO B 261
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: ADH_SHORT (A:142-170,B:142-170)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ADH_SHORT
PS00061
Short-chain dehydrogenases/reductases family signature.
FABG_VIBCH
138-166
2
A:142-170
B:142-170
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3rsha_ (A:)
1b: SCOP_d3rshb_ (B:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
NAD(P)-binding Rossmann-fold domains
(1604)
Superfamily
:
NAD(P)-binding Rossmann-fold domains
(1604)
Family
:
Tyrosine-dependent oxidoreductases
(503)
Protein domain
:
automated matches
(114)
Vibrio cholerae [TaxId: 243277]
(7)
1a
d3rsha_
A:
1b
d3rshb_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_adh_short_3rshB01 (B:10-174)
1b: PFAM_adh_short_3rshB02 (B:10-174)
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Clan
:
NADP_Rossmann
(1239)
Family
:
adh_short
(92)
Vibrio cholerae
(2)
1a
adh_short-3rshB01
B:10-174
1b
adh_short-3rshB02
B:10-174
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Asymmetric Unit 1
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