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3RRP
Biol. Unit 1
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Asym.Unit (283 KB)
Biol.Unit 1 (549 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF FUMARATE HYDRATASE FUM FROM MYCOBACTERIUM ABSCESSUS WITH MALATE BOUND
Authors
:
Seattle Structural Genomics Center For Infectious Disease (S
Date
:
29 Apr 11 (Deposition) - 11 May 11 (Release) - 22 Apr 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (2x)
Keywords
:
Structural Genomics, Seattle Structural Genomics Center For Infectious Disease, Ssgcid, Mycobacterium, Tuberculosis, Fumerate, Malic Acid, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Baugh, I. Phan, D. W. Begley, M. C. Clifton, B. Armour, D. M. Dranow, B. M. Taylor, M. M. Muruthi, J. Abendroth, J. W. Fairman, D. Fox, S. H. Dieterich, B. L. Staker, A. S. Gardberg, R. Choi, S. N. Hewitt, A. J. Napuli, J. Myers, L. K. Barrett, Y. Zhang, M. Ferrell, E. Mundt, K. Thompkins, N. Tran, S. Lyons-Abbott, A. Abramov, A. Sekar, D. Serbzhinskiy, D. Lorimer, G. W. Buchko, R. Stacy, L. J. Stewart, T. E. Edwards, W. C. Van Voorhis, P. J. Myler
Increasing The Structural Coverage Of Tuberculosis Drug Targets.
Tuberculosis (Edinb) V. 95 142 2015
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Hetero Components
(2, 10)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
2a: (2S)-2-HYDROXYBUTANEDIOIC ACID (LMRa)
2b: (2S)-2-HYDROXYBUTANEDIOIC ACID (LMRb)
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No.
Name
Count
Type
Full Name
1
EDO
6
Ligand/Ion
1,2-ETHANEDIOL
2
LMR
4
Ligand/Ion
(2S)-2-HYDROXYBUTANEDIOIC ACID
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
SER A:101 , THR A:103 , SER A:137 , SER A:138 , ASN A:139 , THR A:185 , HIS A:186 , GLY B:316 , SER B:317 , SER B:318 , ILE B:319 , MET B:320 , LYS B:323 , ASN B:325
BINDING SITE FOR RESIDUE LMR A 468
2
AC2
SOFTWARE
SER A:403 , ALA A:427 , LYS A:432 , LEU B:302
BINDING SITE FOR RESIDUE EDO A 469
3
AC3
SOFTWARE
GLY A:316 , SER A:317 , SER A:318 , ILE A:319 , MET A:320 , LYS A:323 , ASN A:325 , SER B:101 , THR B:103 , SER B:137 , SER B:138 , ASN B:139 , THR B:185 , HIS B:186
BINDING SITE FOR RESIDUE LMR B 468
4
AC4
SOFTWARE
GLU A:16 , GLU B:402 , ILE B:407 , THR B:433 , ILE B:434 , ARG B:435 , HOH B:719
BINDING SITE FOR RESIDUE EDO B 469
5
AC5
SOFTWARE
LEU A:302 , SER B:403 , ALA B:427 , LYS B:432 , HOH B:500 , HOH B:719
BINDING SITE FOR RESIDUE EDO B 470
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3rrpa_ (A:)
1b: SCOP_d3rrpb_ (B:)
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(
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Class
:
All alpha proteins
(14657)
Fold
:
L-aspartase-like
(67)
Superfamily
:
L-aspartase-like
(67)
Family
:
automated matches
(18)
Protein domain
:
automated matches
(18)
Mycobacterium abscessus [TaxId: 561007]
(1)
1a
d3rrpa_
A:
1b
d3rrpb_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_FumaraseC_C_3rrpB01 (B:407-465)
1b: PFAM_FumaraseC_C_3rrpB02 (B:407-465)
2a: PFAM_Lyase_1_3rrpB03 (B:15-341)
2b: PFAM_Lyase_1_3rrpB04 (B:15-341)
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(
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(
)
Clan
:
no clan defined [family: FumaraseC_C]
(10)
Family
:
FumaraseC_C
(10)
Mycobacterium abscessus (strain ATCC 19977 / DSM 44196)
(1)
1a
FumaraseC_C-3rrpB01
B:407-465
1b
FumaraseC_C-3rrpB02
B:407-465
Clan
:
no clan defined [family: Lyase_1]
(27)
Family
:
Lyase_1
(27)
Mycobacterium abscessus (strain ATCC 19977 / DSM 44196)
(1)
2a
Lyase_1-3rrpB03
B:15-341
2b
Lyase_1-3rrpB04
B:15-341
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Asym.Unit (283 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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