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3RRO
Biol. Unit 1
Info
Asym.Unit (166 KB)
Biol.Unit 1 (314 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF 3-KETOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (FABG) FROM VIBRIO CHOLERAE
Authors
:
J. Hou, M. Chruszcz, D. R. Cooper, M. Grabowski, H. Zheng, T. Osinski, I. W. Anderson, W. Minor, Center For Structural Genomics Of Infect Diseases (Csgid)
Date
:
29 Apr 11 (Deposition) - 18 May 11 (Release) - 23 Mar 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (2x)
Keywords
:
Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Oxidoreductase, Fabg, Acyl Carrier Protein, Cell Plasma
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Hou, H. Zheng, M. Chruszcz, M. D. Zimmerman, I. A. Shumilin, T. Osinski, M. Demas, S. Grimshaw, W. Minor
Dissecting The Structural Elements For The Activation Of Beta-Ketoacyl-(Acyl Carrier Protein) Reductase From Vibrio Cholerae.
J. Bacteriol. V. 198 463 2015
[
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Hetero Components
(4, 44)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
3a: GLYCEROL (GOLa)
4a: TRIETHYLENE GLYCOL (PGEa)
4b: TRIETHYLENE GLYCOL (PGEb)
5a: SULFATE ION (SO4a)
5b: SULFATE ION (SO4b)
5c: SULFATE ION (SO4c)
5d: SULFATE ION (SO4d)
5e: SULFATE ION (SO4e)
5f: SULFATE ION (SO4f)
5g: SULFATE ION (SO4g)
5h: SULFATE ION (SO4h)
5i: SULFATE ION (SO4i)
5j: SULFATE ION (SO4j)
5k: SULFATE ION (SO4k)
5l: SULFATE ION (SO4l)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
EDO
14
Ligand/Ion
1,2-ETHANEDIOL
3
GOL
2
Ligand/Ion
GLYCEROL
4
PGE
4
Ligand/Ion
TRIETHYLENE GLYCOL
5
SO4
24
Ligand/Ion
SULFATE ION
[
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]
Sites
(23, 23)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LYS A:103 , GLU A:104
BINDING SITE FOR RESIDUE SO4 A 249
02
AC2
SOFTWARE
ARG A:19 , GLY A:20 , LYS A:23
BINDING SITE FOR RESIDUE SO4 A 250
03
AC3
SOFTWARE
GLY A:82 , GLY A:83 , LYS A:132
BINDING SITE FOR RESIDUE SO4 A 251
04
AC4
SOFTWARE
SER A:18 , ARG A:19 , ALA A:40 , THR A:41 , HOH A:313
BINDING SITE FOR RESIDUE SO4 A 252
05
AC5
SOFTWARE
ARG A:133 , ARG A:176
BINDING SITE FOR RESIDUE SO4 A 253
06
AC6
SOFTWARE
ASP A:96 , ALA A:150 , GLY A:151 , HOH A:361
BINDING SITE FOR RESIDUE PGE A 254
07
AC7
SOFTWARE
ILE A:248 , LYS B:167 , EDO B:259 , HOH B:305
BINDING SITE FOR RESIDUE EDO A 255
08
AC8
SOFTWARE
ARG A:19 , GLY A:20 , ILE A:21 , GLY A:22 , ASN A:90 , THR A:190 , EDO A:257
BINDING SITE FOR RESIDUE EDO A 256
09
AC9
SOFTWARE
ARG A:19 , GLY A:20 , THR A:190 , ASP A:191 , EDO A:256
BINDING SITE FOR RESIDUE EDO A 257
10
BC1
SOFTWARE
GLU A:8 , SER A:175 , ARG A:176
BINDING SITE FOR RESIDUE GOL A 258
11
BC2
SOFTWARE
LYS B:103 , GLU B:104 , HOH B:327
BINDING SITE FOR RESIDUE SO4 B 249
12
BC3
SOFTWARE
SER A:2 , ARG A:32 , SER B:2 , ARG B:32
BINDING SITE FOR RESIDUE SO4 B 250
13
BC4
SOFTWARE
ARG B:19 , GLY B:20 , LYS B:23 , EDO B:257 , HOH B:352
BINDING SITE FOR RESIDUE SO4 B 251
14
BC5
SOFTWARE
GLY B:16 , ALA B:17 , SER B:18 , ALA B:40 , THR B:41 , HOH B:340
BINDING SITE FOR RESIDUE SO4 B 252
15
BC6
SOFTWARE
ILE B:93 , ARG B:95 , HOH B:331
BINDING SITE FOR RESIDUE SO4 B 253
16
BC7
SOFTWARE
ARG B:133 , ARG B:176
BINDING SITE FOR RESIDUE SO4 B 254
17
BC8
SOFTWARE
GLY B:82 , GLY B:83 , LYS B:132
BINDING SITE FOR RESIDUE SO4 B 255
18
BC9
SOFTWARE
LYS A:167 , ILE B:248
BINDING SITE FOR RESIDUE EDO B 256
19
CC1
SOFTWARE
ARG B:19 , GLY B:20 , THR B:190 , ASP B:191 , SO4 B:251 , EDO B:258
BINDING SITE FOR RESIDUE EDO B 257
20
CC2
SOFTWARE
GLY B:16 , ARG B:19 , ILE B:21 , GLY B:22 , ASN B:90 , EDO B:257
BINDING SITE FOR RESIDUE EDO B 258
21
CC3
SOFTWARE
EDO A:255 , GLY B:145 , ILE B:163 , LYS B:167 , HOH B:305
BINDING SITE FOR RESIDUE EDO B 259
22
CC4
SOFTWARE
ASP B:96 , ASN B:97 , ALA B:150 , GLY B:151
BINDING SITE FOR RESIDUE PGE B 260
23
CC5
SOFTWARE
TYR B:155 , LYS B:159
BINDING SITE FOR RESIDUE CL B 261
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: ADH_SHORT (A:142-170,B:142-170)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ADH_SHORT
PS00061
Short-chain dehydrogenases/reductases family signature.
FABG_VIBCH
138-166
4
A:142-170
B:142-170
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3rroa_ (A:)
1b: SCOP_d3rrob_ (B:)
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(
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
NAD(P)-binding Rossmann-fold domains
(1604)
Superfamily
:
NAD(P)-binding Rossmann-fold domains
(1604)
Family
:
Tyrosine-dependent oxidoreductases
(503)
Protein domain
:
automated matches
(114)
Vibrio cholerae [TaxId: 243277]
(7)
1a
d3rroa_
A:
1b
d3rrob_
B:
[
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_adh_short_3rroB01 (B:10-174)
1b: PFAM_adh_short_3rroB02 (B:10-174)
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Clans
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Families
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(
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Organisms
(
)
(
)
Clan
:
NADP_Rossmann
(1239)
Family
:
adh_short
(92)
Vibrio cholerae
(2)
1a
adh_short-3rroB01
B:10-174
1b
adh_short-3rroB02
B:10-174
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Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
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Asymmetric Unit 1
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Asym.Unit (166 KB)
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