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3RRO
Asym. Unit
Info
Asym.Unit (166 KB)
Biol.Unit 1 (314 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF 3-KETOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (FABG) FROM VIBRIO CHOLERAE
Authors
:
J. Hou, M. Chruszcz, D. R. Cooper, M. Grabowski, H. Zheng, T. Osinski, I. W. Anderson, W. Minor, Center For Structural Genomics Of Infect Diseases (Csgid)
Date
:
29 Apr 11 (Deposition) - 18 May 11 (Release) - 23 Mar 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (2x)
Keywords
:
Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Oxidoreductase, Fabg, Acyl Carrier Protein, Cell Plasma
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Hou, H. Zheng, M. Chruszcz, M. D. Zimmerman, I. A. Shumilin, T. Osinski, M. Demas, S. Grimshaw, W. Minor
Dissecting The Structural Elements For The Activation Of Beta-Ketoacyl-(Acyl Carrier Protein) Reductase From Vibrio Cholerae.
J. Bacteriol. V. 198 463 2015
[
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Hetero Components
(5, 23)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
3a: GLYCEROL (GOLa)
4a: TRIETHYLENE GLYCOL (PGEa)
4b: TRIETHYLENE GLYCOL (PGEb)
5a: SULFATE ION (SO4a)
5b: SULFATE ION (SO4b)
5c: SULFATE ION (SO4c)
5d: SULFATE ION (SO4d)
5e: SULFATE ION (SO4e)
5f: SULFATE ION (SO4f)
5g: SULFATE ION (SO4g)
5h: SULFATE ION (SO4h)
5i: SULFATE ION (SO4i)
5j: SULFATE ION (SO4j)
5k: SULFATE ION (SO4k)
5l: SULFATE ION (SO4l)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
1
Ligand/Ion
CHLORIDE ION
2
EDO
7
Ligand/Ion
1,2-ETHANEDIOL
3
GOL
1
Ligand/Ion
GLYCEROL
4
PGE
2
Ligand/Ion
TRIETHYLENE GLYCOL
5
SO4
12
Ligand/Ion
SULFATE ION
[
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]
Sites
(23, 23)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LYS A:103 , GLU A:104
BINDING SITE FOR RESIDUE SO4 A 249
02
AC2
SOFTWARE
ARG A:19 , GLY A:20 , LYS A:23
BINDING SITE FOR RESIDUE SO4 A 250
03
AC3
SOFTWARE
GLY A:82 , GLY A:83 , LYS A:132
BINDING SITE FOR RESIDUE SO4 A 251
04
AC4
SOFTWARE
SER A:18 , ARG A:19 , ALA A:40 , THR A:41 , HOH A:313
BINDING SITE FOR RESIDUE SO4 A 252
05
AC5
SOFTWARE
ARG A:133 , ARG A:176
BINDING SITE FOR RESIDUE SO4 A 253
06
AC6
SOFTWARE
ASP A:96 , ALA A:150 , GLY A:151 , HOH A:361
BINDING SITE FOR RESIDUE PGE A 254
07
AC7
SOFTWARE
ILE A:248 , LYS B:167 , EDO B:259 , HOH B:305
BINDING SITE FOR RESIDUE EDO A 255
08
AC8
SOFTWARE
ARG A:19 , GLY A:20 , ILE A:21 , GLY A:22 , ASN A:90 , THR A:190 , EDO A:257
BINDING SITE FOR RESIDUE EDO A 256
09
AC9
SOFTWARE
ARG A:19 , GLY A:20 , THR A:190 , ASP A:191 , EDO A:256
BINDING SITE FOR RESIDUE EDO A 257
10
BC1
SOFTWARE
GLU A:8 , SER A:175 , ARG A:176
BINDING SITE FOR RESIDUE GOL A 258
11
BC2
SOFTWARE
LYS B:103 , GLU B:104 , HOH B:327
BINDING SITE FOR RESIDUE SO4 B 249
12
BC3
SOFTWARE
SER A:2 , ARG A:32 , SER B:2 , ARG B:32
BINDING SITE FOR RESIDUE SO4 B 250
13
BC4
SOFTWARE
ARG B:19 , GLY B:20 , LYS B:23 , EDO B:257 , HOH B:352
BINDING SITE FOR RESIDUE SO4 B 251
14
BC5
SOFTWARE
GLY B:16 , ALA B:17 , SER B:18 , ALA B:40 , THR B:41 , HOH B:340
BINDING SITE FOR RESIDUE SO4 B 252
15
BC6
SOFTWARE
ILE B:93 , ARG B:95 , HOH B:331
BINDING SITE FOR RESIDUE SO4 B 253
16
BC7
SOFTWARE
ARG B:133 , ARG B:176
BINDING SITE FOR RESIDUE SO4 B 254
17
BC8
SOFTWARE
GLY B:82 , GLY B:83 , LYS B:132
BINDING SITE FOR RESIDUE SO4 B 255
18
BC9
SOFTWARE
LYS A:167 , ILE B:248
BINDING SITE FOR RESIDUE EDO B 256
19
CC1
SOFTWARE
ARG B:19 , GLY B:20 , THR B:190 , ASP B:191 , SO4 B:251 , EDO B:258
BINDING SITE FOR RESIDUE EDO B 257
20
CC2
SOFTWARE
GLY B:16 , ARG B:19 , ILE B:21 , GLY B:22 , ASN B:90 , EDO B:257
BINDING SITE FOR RESIDUE EDO B 258
21
CC3
SOFTWARE
EDO A:255 , GLY B:145 , ILE B:163 , LYS B:167 , HOH B:305
BINDING SITE FOR RESIDUE EDO B 259
22
CC4
SOFTWARE
ASP B:96 , ASN B:97 , ALA B:150 , GLY B:151
BINDING SITE FOR RESIDUE PGE B 260
23
CC5
SOFTWARE
TYR B:155 , LYS B:159
BINDING SITE FOR RESIDUE CL B 261
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: ADH_SHORT (A:142-170,B:142-170)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ADH_SHORT
PS00061
Short-chain dehydrogenases/reductases family signature.
FABG_VIBCH
138-166
2
A:142-170
B:142-170
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3rroa_ (A:)
1b: SCOP_d3rrob_ (B:)
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(
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Folds
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(
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(
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(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
NAD(P)-binding Rossmann-fold domains
(1604)
Superfamily
:
NAD(P)-binding Rossmann-fold domains
(1604)
Family
:
Tyrosine-dependent oxidoreductases
(503)
Protein domain
:
automated matches
(114)
Vibrio cholerae [TaxId: 243277]
(7)
1a
d3rroa_
A:
1b
d3rrob_
B:
[
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]
CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_adh_short_3rroB01 (B:10-174)
1b: PFAM_adh_short_3rroB02 (B:10-174)
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Clans
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(
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Families
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(
)
Organisms
(
)
(
)
Clan
:
NADP_Rossmann
(1239)
Family
:
adh_short
(92)
Vibrio cholerae
(2)
1a
adh_short-3rroB01
B:10-174
1b
adh_short-3rroB02
B:10-174
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Nucleic
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Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
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Asymmetric Unit 1
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Asym.Unit (166 KB)
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