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3RQT
Asym. Unit
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Asym.Unit (189 KB)
Biol.Unit 1 (183 KB)
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(1)
Title
:
1.5 ANGSTROM CRYSTAL STRUCTURE OF THE COMPLEX OF LIGAND BINDING COMPONENT OF ABC-TYPE IMPORT SYSTEM FROM STAPHYLOCOCCUS AUREUS WITH NICKEL AND TWO HISTIDINES
Authors
:
G. Minasov, A. Halavaty, L. Shuvalova, I. Dubrovska, J. Winsor, O. Kiry F. Falugi, M. Bottomley, F. Bagnoli, G. Grandi, W. F. Anderson, Center Structural Genomics Of Infectious Diseases (Csgid)
Date
:
28 Apr 11 (Deposition) - 11 May 11 (Release) - 11 May 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Ligand Binding Component, Abc-Type Import System, Nickel, Single Or Di-Peptides, Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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Reference
:
G. Minasov, A. Halavaty, L. Shuvalova, I. Dubrovska, J. Winsor, O. Kiryukhina, F. Falugi, M. Bottomley, F. Bagnoli, G. Grandi, W. F. Anderson
1. 5 Angstrom Crystal Structure Of The Complex Of Ligand Binding Component Of Abc-Type Import System From Staphylococcus Aureus With Nickel And Two Histidines.
To Be Published
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Hetero Components
(5, 15)
Info
All Hetero Components
1a: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ET... (EPEa)
1b: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ET... (EPEb)
2a: HISTIDINE (HISa)
2b: HISTIDINE (HISb)
3a: SELENOMETHIONINE (MSEa)
3b: SELENOMETHIONINE (MSEb)
3c: SELENOMETHIONINE (MSEc)
3d: SELENOMETHIONINE (MSEd)
3e: SELENOMETHIONINE (MSEe)
3f: SELENOMETHIONINE (MSEf)
4a: NICKEL (II) ION (NIa)
5a: SULFATE ION (SO4a)
5b: SULFATE ION (SO4b)
5c: SULFATE ION (SO4c)
5d: SULFATE ION (SO4d)
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No.
Name
Count
Type
Full Name
1
EPE
2
Ligand/Ion
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
2
HIS
2
Mod. Amino Acid
HISTIDINE
3
MSE
6
Mod. Amino Acid
SELENOMETHIONINE
4
NI
1
Ligand/Ion
NICKEL (II) ION
5
SO4
4
Ligand/Ion
SULFATE ION
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:25 , ARG A:231 , GLU A:352 , TYR A:366 , SER A:367 , PHE A:368 , GLY A:369 , ILE A:390 , HIS A:472 , NI A:473 , HOH A:843 , HOH A:915
BINDING SITE FOR RESIDUE HIS A 471
2
AC2
SOFTWARE
LEU A:14 , ARG A:231 , TYR A:319 , ARG A:322 , ILE A:351 , GLU A:352 , TYR A:366 , SER A:367 , HIS A:471 , NI A:473 , HOH A:811
BINDING SITE FOR RESIDUE HIS A 472
3
AC3
SOFTWARE
HIS A:471 , HIS A:472
BINDING SITE FOR RESIDUE NI A 473
4
AC4
SOFTWARE
ILE A:45 , GLU A:46 , LYS A:47 , TYR A:53 , TYR A:98 , LYS A:386 , ASP A:387 , ASP A:401 , HOH A:765 , HOH A:812 , HOH A:907 , HOH A:1034
BINDING SITE FOR RESIDUE EPE A 474
5
AC5
SOFTWARE
GLU A:87 , ILE A:102 , SER A:103 , PRO A:282 , TYR A:283 , HOH A:582 , HOH A:609 , HOH A:674 , HOH A:982
BINDING SITE FOR RESIDUE EPE A 475
6
AC6
SOFTWARE
LYS A:51 , LYS A:66 , ASP A:67 , ASN A:399 , HOH A:1038
BINDING SITE FOR RESIDUE SO4 A 476
7
AC7
SOFTWARE
ILE A:216 , GLU A:217 , LEU A:222 , LYS A:223 , VAL A:224 , HOH A:607 , HOH A:668
BINDING SITE FOR RESIDUE SO4 A 477
8
AC8
SOFTWARE
GLN A:145 , TYR A:158 , LYS A:159 , GLN A:160 , ARG A:162 , GLN A:330 , GLN A:333 , HOH A:942
BINDING SITE FOR RESIDUE SO4 A 478
9
AC9
SOFTWARE
LYS A:156 , LYS A:315 , LYS A:346 , TYR A:354 , HOH A:745 , HOH A:1067 , HOH A:1182
BINDING SITE FOR RESIDUE SO4 A 479
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_SBP_bac_5_3rqtA01 (A:44-392)
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Clan
:
PBP
(391)
Family
:
SBP_bac_5
(33)
Staphylococcus aureus (strain NCTC 8325)
(1)
1a
SBP_bac_5-3rqtA01
A:44-392
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Asymmetric Unit 1
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Asym.Unit (189 KB)
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