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3RP2
Asym. Unit
Info
Asym.Unit (77 KB)
Biol.Unit 1 (74 KB)
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(1)
Title
:
THE STRUCTURE OF RAT MAST CELL PROTEASE II AT 1.9-ANGSTROMS RESOLUTION
Authors
:
R. Reynolds, S. Remington, L. Weaver, R. Fischer, W. Anderson, H. Ammon, B. Matthews
Date
:
10 Sep 84 (Deposition) - 29 Oct 84 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Serine Proteinase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. J. Remington, R. G. Woodbury, R. A. Reynolds, B. W. Matthews, H. Neurath
The Structure Of Rat Mast Cell Protease Ii At 1. 9-A Resolution.
Biochemistry V. 27 8097 1988
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(3, 6)
Info
All PROSITE Patterns/Profiles
1: TRYPSIN_DOM (A:16-243,B:16-243)
2: TRYPSIN_HIS (A:53-58,B:53-58)
3: TRYPSIN_SER (A:189-200,B:189-200)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TRYPSIN_DOM
PS50240
Serine proteases, trypsin domain profile.
MCPT2_RAT
21-244
2
A:16-243
B:16-243
2
TRYPSIN_HIS
PS00134
Serine proteases, trypsin family, histidine active site.
MCPT2_RAT
61-66
2
A:53-58
B:53-58
3
TRYPSIN_SER
PS00135
Serine proteases, trypsin family, serine active site.
MCPT2_RAT
196-207
2
A:189-200
B:189-200
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Exons
(4, 8)
Info
All Exons
Exon 1.2 (A:16-62 (gaps) | B:16-62 (gaps))
Exon 1.3 (A:62-107 | B:62-107)
Exon 1.4 (A:108-192 (gaps) | B:108-192 (gaps...)
Exon 1.5 (A:193-243 (gaps) | B:193-243 (gaps...)
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All Exon Boundaries
1: Boundary 1.1/1.2
2: Boundary 1.2/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5
5: Boundary 1.5/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSRNOT00000027988
1
ENSRNOE00000299900
chr15:
34556079-34556133
55
MCPT2_RAT
1-19
19
0
-
-
1.2
ENSRNOT00000027988
2
ENSRNOE00000302455
chr15:
34556641-34556791
151
MCPT2_RAT
19-69
51
2
A:16-62 (gaps)
B:16-62 (gaps)
50
50
1.3
ENSRNOT00000027988
3
ENSRNOE00000326039
chr15:
34557309-34557444
136
MCPT2_RAT
69-114
46
2
A:62-107
B:62-107
46
46
1.4
ENSRNOT00000027988
4
ENSRNOE00000201072
chr15:
34557648-34557902
255
MCPT2_RAT
115-199
85
2
A:108-192 (gaps)
B:108-192 (gaps)
89
89
1.5
ENSRNOT00000027988
5
ENSRNOE00000201082
chr15:
34558267-34558413
147
MCPT2_RAT
200-247
48
2
A:193-243 (gaps)
B:193-243 (gaps)
53
53
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3rp2a_ (A:)
1b: SCOP_d3rp2b_ (B:)
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Protein Domains
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Organisms
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)
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)
Class
:
All beta proteins
(24004)
Fold
:
Trypsin-like serine proteases
(1752)
Superfamily
:
Trypsin-like serine proteases
(1752)
Family
:
Eukaryotic proteases
(1343)
Protein domain
:
Chymase II (mast cell proteinase II)
(1)
Rat (Rattus rattus) [TaxId: 10117]
(1)
1a
d3rp2a_
A:
1b
d3rp2b_
B:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_3rp2A01 (A:16-27,A:121-232)
1b: CATH_3rp2B01 (B:16-27,B:121-232)
1c: CATH_3rp2A02 (A:28-120,A:233-241)
1d: CATH_3rp2B02 (B:28-120,B:233-241)
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Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Thrombin, subunit H
(1535)
Homologous Superfamily
:
Trypsin-like serine proteases
(1488)
Black rat (Rattus rattus)
(11)
1a
3rp2A01
A:16-27,A:121-232
1b
3rp2B01
B:16-27,B:121-232
1c
3rp2A02
A:28-120,A:233-241
1d
3rp2B02
B:28-120,B:233-241
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Trypsin_3rp2B01 (B:16-238)
1b: PFAM_Trypsin_3rp2B02 (B:16-238)
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Clan
:
Peptidase_PA
(797)
Family
:
Trypsin
(679)
Rattus norvegicus (Rat)
(15)
1a
Trypsin-3rp2B01
B:16-238
1b
Trypsin-3rp2B02
B:16-238
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Asymmetric Unit 1
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